Job Description P77775 Confidence 97.56% Date Thu Jan 5 12:32:44 GMT 2012 Rank 339 Aligned Residues 153 % Identity 21% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

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		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query SS confidence								.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query Sequence		N	I	V	I	T	G	.	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	Q	I	T	V	V	T	R	N	P	Q	K	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	.	.	.	.	.
Query Conservation								.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Alig confidence								.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		Y	V	L	I	T	G	A	G	K	G	S	I	G	A	E	V	L	Q	G	L	L	Q	G	G	A	K	V	V	V	T	T	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I	E	F	I	Y	D	T	E
Template Known Secondary structure							S			S	S	S												T	T								S	S																			T	T										T	T														S		T
Template Predicted Secondary structure
Template SS confidence
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	V	D	A	V	I	N	L	A	G	E	P	I	A	D	K	R	W	T	H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	.	.	.	.	.	.	.	.	.	.	.	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D
Query Conservation		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	G	G	L	G	W	D	L	D	A	I	I	P	F	A	A	I	P	E	Q	G	I	E	L	E	H	I	D	S	K	S	E	F	A	H	R	I	M	L	T	N	I	L	R	M	M	G	C	V	K	K	Q	K	S	A	R	G	I	E	T	R	P	A	Q	V	I	L	P	M	S	P	N	H	G	T	F	G	G	D
Template Known Secondary structure		T	T	T	S						S												S	B		G	G	G													T																T	T	T			S											S		T	T		S	S		B
Template Predicted Secondary structure
Template SS confidence
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	F	T	H	K	L	C	A	R	W	E	E	I	A	C	R	A	Q	S	D	K	T	R	V	C	L	L	R	T	G	V	V	L	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	E	S	K	L	S	L	E	T	L	F	N	R	W	H	S	E	.	S	W	A	N	Q	L	T	V	C	G	A	I	I	G
Template Known Secondary structure		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G								S	.	S		T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		837	.														.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.		.	.	.	860	.	.	.	.	.	.	.	.	.	870

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions