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Job DescriptionP77775
Confidence100.00%DateThu Jan 5 12:32:44 GMT 2012
Rank33Aligned Residues295
% Identity15%Templatec1t2aC_
PDB info PDB header:structural genomics,lyaseChain: C: PDB Molecule:gdp-mannose 4,6 dehydratase; PDBTitle: crystal structure of human gdp-d-mannose 4,6-dehydratase
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30....... ..40.........50.........60.........70...
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Query Sequence  NIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKA. . . . . . . . SSVLGPRVTLWQGLADQSNLNGVDAVINLAGEPIAD
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Template Sequence  VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSH
Template Known Secondary structure  TTTSTT



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   25....30.........40.........50.........60.........70.........80.........90.........100....
 
   74.....80.........90.........100.........110.........120.........130. ........140.........150
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Query Sequence  KRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGDLGEVVVTEEEP. . . PHNEFTHKLCARWEEIACR
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Template Sequence  VKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNF
Template Known Secondary structure  STTT
TTT
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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   151........160.........170.. .......180......... 190.........200.........210.........220..
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Query Sequence  AQSDKTRVCLLRTGVVLAPDGG. . . . . . . ILGKMLPPFRLGLGGPI. GSGRQYLAWIHIDDMVNGILWLLDNELRGPFNM
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Template Sequence  REAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVI
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TTS
TTSTTS
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   194.....200.........210.........220.........230.........240.........250.........260.........270...
 
   223......230.........240.........250.........260..... ....270........ .280.........
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Query Sequence  VSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLV. . . . . . . . . . . . LGGQRALPKRLEE. AGFAFRWYDLE
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Template Sequence  ATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRV. AFD
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TTT

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   274.....280.........290.........300.........310.........320.........330.........340......... 350..
 
   290.......
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Query Sequence  EALADVVR
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Template Sequence  ELVREMVH
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   353......360
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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