Job Description P77775 Confidence 100.00% Date Thu Jan 5 12:32:44 GMT 2012 Rank 17 Aligned Residues 290 % Identity 13% Template c1n7gB_ PDB info PDB header:lyase Chain: B: PDB Molecule:gdp-d-mannose-4,6-dehydratase; PDBTitle: crystal structure of the gdp-mannose 4,6-dehydratase2 ternary complex with nadph and gdp-rhamnose. Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.													.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	Q	I	T	V	V	T	R	N	P	Q	K	A	S	.	.	.	.	.	.	.	.	.	.	.	.	S	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	V	D	A	V	I	N	L	A	G	E
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	L	I	T	G	I	T	G	Q	D	G	S	Y	L	T	E	F	L	L	G	K	G	Y	E	V	H	G	L	I	R	R	S	S	N	F	N	T	Q	R	I	N	H	I	Y	I	D	K	A	L	M	K	L	H	Y	A	D	L	T	D	A	S	S	L	R	R	W	I	D	V	I	K	P	D	E	V	Y	N	L	A
Template Known Secondary structure							T	T	T	S												T	T	T											S	S				T	T	T									S								T	T															S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		P	I	A	D	K	R	W	T	H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	.	.	.	.	D	L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	F	T	H	K	L	C	A	R	W	E
Query Conservation																																																				.	.	.	.
Alig confidence																																																				.	.	.	.
Template Conservation
Template Sequence		A	Q	S	H	V	A	V	S	F	E	I	P	D	Y	T	A	D	V	V	A	T	G	A	L	R	L	L	E	A	V	R	S	H	T	I	D	S	G	R	T	V	K	Y	Y	Q	A	G	S	S	E	M	F	G	S	T	P	P	P	Q	S	E	T	T	P	F	H	P	R	S	P	Y	A	A	S	K	C	A	A	H	W
Template Known Secondary structure												S									T																													G	G	G	G	T	T	S		S	S	B		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.								.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.																		.
Query SS confidence																													.	.	.	.	.	.	.																		.
Query Sequence		E	I	A	C	R	A	Q	S	D	K	T	R	V	C	L	L	R	T	G	V	V	L	A	P	D	G	G	.	.	.	.	.	.	.	I	L	G	K	M	L	P	P	F	R	L	G	L	G	G	P	I	.	G	S	G	R	Q	Y	L	A	W	I	H	I	D	D	M	V	N	G	I	L	W	L	L	D	N	E	L	R
Query Conservation																													.	.	.	.	.	.	.																		.
Alig confidence																													.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		Y	T	V	N	Y	R	E	A	Y	G	L	F	A	C	N	G	I	L	F	N	H	E	S	P	R	R	G	E	N	F	V	T	R	K	I	T	R	A	L	G	R	I	K	V	G	L	Q	T	K	L	F	L	G	N	L	Q	A	S	R	D	W	G	F	A	G	D	Y	V	E	A	M	W	L	M	L	Q	Q	E	K	P
Template Known Secondary structure																									T	T	S		T	T	S														T	T	S							S		S	S																					S	S	S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		G	P	F	N	M	V	S	P	Y	P	V	R	N	E	Q	F	A	H	A	L	G	H	A	L	H	R	P	A	I	L	R	V	P	A	T	A	I	R	L	L	M	G	E	S	S	V	L	V	L	G	G	Q	R	A	L	P	K	R	L	E	E	.	A	G	F	A	F	R	W	Y	D	L	E	E	A	L	A	D	V	V
Query Conservation																																																															.
Alig confidence																																			.	.	.	.	.																								.								.
Template Conservation																																			.	.	.	.	.																																.
Template Sequence		D	D	Y	V	V	A	T	E	E	G	H	T	V	E	E	F	L	D	V	S	F	G	Y	L	G	L	N	W	K	D	Y	V	E	.	.	.	.	.	I	D	Q	R	Y	F	R	P	A	E	V	D	N	L	Q	G	D	A	S	K	A	K	E	V	L	G	W	K	P	Q	V	.	G	F	E	K	L	V	K	M	M	V
Template Known Secondary structure									S																T	T			G	G	G	T			.	.	.	.	.			G	G	G	S		S	S				B			B															S	.
Template Predicted Secondary structure																																			.	.	.	.	.																																.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.
		297
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		349

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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