Job Description P77775 Confidence 97.98% Date Thu Jan 5 12:32:44 GMT 2012 Rank 301 Aligned Residues 168 % Identity 13% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.	.	.	.													.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																											.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	.	.	.	.	.	.	.	Q	I	T	V	V	T	R	N	P	Q	K	A	.	.	.	.	.	.	.	.	.	.	.	.	S	S	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	V	D
Query Conservation																											.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T	A	F	K	D	A	D
Template Known Secondary structure								S	T	T	S												T	T	T	T	T		T	T											S																	T	T	T		T	T								S						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	N	L	A	G	E	P	I	A	D	K	R	W	T	H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D	L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	F	T	H	K	L	C
Query Conservation
Alig confidence										.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		V	A	L	L	V	G	A	R	.	.	.	.	P	R	G	P	G	M	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N	P	A	N	T	N	A	Y	I	A	M	K	S	A	P	S	L	P	A	K	N	F	T	A	M	L	R	L
Template Known Secondary structure										.	.	.	.				T	T																									S		T	T							S	S	S											T		T	T	S		G	G	G
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	W	E	E	I	A	C	R	A	Q	S	D	K	T	R	V	C	L	L	R	T	G	V	V	L	A	P	D	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	H	N	R	A	L	S	Q	I	A	A	K	T	G	K	P	V	S	S	I	E	K	L	F	V	W	G	N	H	S	P
Template Known Secondary structure															T			G	G	G			S					B		S	S	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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