Return to main results Retrieve Phyre Job Id

Job DescriptionP77775
Confidence96.81%DateThu Jan 5 12:32:44 GMT 2012
Rank424Aligned Residues108
% Identity20%Templatec1a5zA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: lactate dehydrogenase from thermotoga maritima (tmldh)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20..... ....30.........40 .........50.........60.........70.
Predicted Secondary structure 







..








.......










Query SS confidence 
























. .














. . . . . . .






























Query Sequence  MNIVITGGTGLIGRHLIPRLLELGH. . QITVVTRNPQKASSV. . . . . . . LGPRVTLWQGLADQSNLNGVDAVINLAGEPI
Query Conservation 









 

  
   
   
 .. 
    
        .......     
                         
Alig confidence 







.















..














.......






























Template Conservation 


 



.
 

   
  
       

 
 

        
 

                  

  





  
   
Template Sequence  MKIGIVGL. GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVPQ
Template Known Secondary structure 


.ST

S
SSGGGS




GGGGTT
S





Template Predicted Secondary structure 


.
























Template SS confidence 















































































   22....... 30.........40.........50.........60.........70.........80.........90.........100
 
   72.......80.........90.........100.........110...
Predicted Secondary structure 














Query SS confidence 









































Query Sequence  ADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGS
Query Conservation                                         
  
Alig confidence 


....


































Template Conservation    
....  
      
  
   
   
    
 
 

  

Template Sequence  KPG. . . . ETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTN
Template Known Secondary structure 
SS....


TT

SS
Template Predicted Secondary structure 


....





Template SS confidence 









































   103.. ....110.........120.........130.........140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions