Job Description P0A7B8 Confidence 100.00% Date Thu Jan 5 11:05:18 GMT 2012 Rank 29 Aligned Residues 173 % Identity 19% Template c3h4pj_ PDB info PDB header:hydrolase Chain: J: PDB Molecule:proteasome subunit alpha; PDBTitle: proteasome 20s core particle from methanocaldococcus2 jannaschii Resolution 4.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		T	T	I	V	S	V	R	R	N	G	H	V	V	I	A	G	D	G	Q	A	T	L	G	N	T	V	M	K	G	N	V	K	K	V	R	R	L	Y	N	D	K	V	I	A	G	F	A	G	G	T	A	D	A	F	T	L	F	E	L	F	E	R	K	L	E	M	H	Q	.	.	G	H	L	V	K	A	A	V	E	L
Query Conservation																																																																						.	.
Alig confidence																																							.																															.	.
Template Conservation																																							.
Template Sequence		T	T	T	V	G	L	I	C	D	D	A	V	I	L	A	T	D	K	R	A	S	L	G	N	L	V	A	D	K	E	A	K	K	L	Y	K	I	.	D	D	Y	I	A	M	T	I	A	G	S	V	G	D	A	Q	A	I	V	R	L	L	I	A	E	A	K	L	Y	K	M	R	T	G	R	N	I	P	P	L	A	C
Template Known Secondary structure										T	T													T	T					S	S								.		T	T							S																							T	S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																																																.	.
Query SS confidence														.	.	.	.	.	.	.	.																																																.	.
Query Sequence		A	K	D	W	R	T	D	R	M	L	R	K	.	.	.	.	.	.	.	.	L	E	A	L	L	A	V	A	D	E	T	A	S	L	I	I	T	G	N	G	D	V	V	Q	P	E	N	D	L	I	A	I	G	S	G	G	P	Y	A	Q	A	A	A	R	A	L	L	.	.	E	N	T	E	L	S	A	R	E	I	A
Query Conservation														.	.	.	.	.	.	.	.																																																.	.
Alig confidence														.	.	.	.	.	.	.	.																									.																							.	.
Template Conservation																																														.
Template Sequence		A	T	L	L	S	N	I	L	H	S	S	R	M	F	P	F	L	T	Q	I	I	I	G	G	Y	D	L	L	E	G	A	K	L	F	S	L	D	P	L	G	G	M	N	E	.	E	K	T	F	T	A	T	G	S	G	S	P	I	A	Y	G	V	L	E	A	G	Y	D	R	D	M	S	V	E	E	G	I	K	L	A
Template Known Secondary structure											T	T	T	T	T	T												T	T	T									T	T						.		S	S					S	T	T									T	T	S			T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	L	D	I	A	G	D	I	C	I	Y	T	N	H	F	H	T	I	E	E	L	S	Y	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	A	L	K	S	A	M	E	R	D	T	F	S	G	N	G	I	S	L	A	V	I	T	K	D	G
Template Known Secondary structure										T	S		T	T	S		S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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