Job Description P0A7B8 Confidence 99.97% Date Thu Jan 5 11:05:18 GMT 2012 Rank 47 Aligned Residues 169 % Identity 24% Template c3h4pB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:proteasome subunit alpha; PDBTitle: proteasome 20s core particle from methanocaldococcus2 jannaschii Resolution 4.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		T	T	I	V	S	V	R	R	N	G	H	V	V	I	A	G	D	G	Q	A	T	L	G	N	T	V	M	K	G	N	V	K	K	V	R	R	L	Y	N	D	K	V	I	A	G	F	A	G	G	T	A	D	A	F	T	L	F	E	L	F	E	R	K	L	E	M	H	Q	.	.	G	H	L	V	K	A	A	V	E	L
Query Conservation																																																																						.	.
Alig confidence																							.																.																															.	.
Template Conservation																							.																.
Template Sequence		T	T	A	I	G	I	A	C	K	D	G	V	V	L	A	V	D	R	R	I	T	.	S	K	L	V	K	I	R	S	I	E	K	I	F	Q	I	.	D	D	H	V	A	A	A	T	S	G	L	V	A	D	A	R	V	L	I	D	R	A	R	L	E	A	Q	I	Y	R	L	T	Y	G	E	E	I	S	I	E	M	L
Template Known Secondary structure										S	S												.	S	S		S		T	T	S								.	S	S	S							B		S																		T	T	T	T		S
Template Predicted Secondary structure																							.																.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		80	.	.	.	.								.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																.	.	.	.																																								.	.
Query SS confidence							.	.	.	.	.	.	.																.	.	.	.																																								.	.
Query Sequence		A	K	D	W	R	.	.	.	.	.	.	.	T	D	R	M	L	R	K	L	E	A	L	L	A	V	A	.	.	.	.	D	E	T	A	S	L	I	I	T	G	N	G	D	V	V	Q	P	E	N	D	L	I	A	I	G	S	G	G	P	Y	A	Q	A	A	A	R	A	L	L	.	.	E	N	T	E	L	S	A	R
Query Conservation							.	.	.	.	.	.	.																.	.	.	.																																								.	.
Alig confidence							.	.	.	.	.	.	.																.	.	.	.																	.	.																						.	.
Template Conservation																																																	.	.
Template Sequence		A	K	K	I	C	D	I	K	Q	A	Y	T	Q	H	G	G	V	R	P	F	G	V	S	L	L	I	A	G	I	D	K	N	E	A	R	L	F	E	T	D	P	S	G	A	L	I	E	.	.	Y	K	A	T	A	I	G	S	G	R	P	V	V	M	E	L	L	E	K	E	Y	R	D	D	I	T	L	D	E	G	L
Template Known Secondary structure												T	T	S	S	S	S						B									T	T									S	S						.	.		S					S	T	T					T	T	T							T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	A	E	K	A	L	D	I	A	G	D	I	C	I	Y	T	N	H	F	H	T	I	E	E	L	S	Y	K	A
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		E	L	A	I	T	A	L	T	K	A	N	E	D	I	.	.	K	P	E	N	V	D	V	C	I	I	T	V	K	D
Template Known Secondary structure												S	S	S		.	.		T	T	S								T	T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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