Job Description P0A7B8 Confidence 100.00% Date Thu Jan 5 11:05:18 GMT 2012 Rank 42 Aligned Residues 171 % Identity 15% Template c3bdmF_ PDB info PDB header:hydrolase Chain: F: PDB Molecule:proteasome component c1; PDBTitle: yeast 20s proteasome:glidobactin a-complex Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		T	T	I	V	S	V	R	R	N	G	H	V	V	I	A	G	D	G	Q	A	T	L	G	N	T	V	M	K	G	N	V	K	K	V	R	R	L	Y	N	D	K	V	I	A	G	F	A	G	G	T	A	D	A	F	T	L	F	E	L	F	E	R	K	L	E	M	H	Q	G	.	.	H	L	V	K	A	A	V	E	L
Query Conservation																																																																							.	.
Alig confidence																							.																.																																.	.
Template Conservation																							.																.
Template Sequence		T	T	S	I	G	I	K	C	N	D	G	V	V	F	A	V	E	K	L	I	T	.	S	K	L	L	V	P	Q	K	N	V	K	I	Q	V	V	.	D	R	H	I	G	C	V	Y	S	G	L	I	P	D	G	R	H	L	V	N	R	G	R	E	E	A	A	S	F	K	K	L	Y	K	T	P	I	P	I	P	A	F
Template Known Secondary structure										T	T												.		T	T	S		T	T	T	S							.	T	T	T																																S
Template Predicted Secondary structure																							.																.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.												.	.	.	.																																								.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.												.	.	.	.																																								.	.	.	.	.
Query Sequence		A	K	D	W	R	T	D	R	M	.	.	.	.	.	.	.	L	R	K	L	E	A	L	L	A	V	A	.	.	.	.	D	E	T	A	S	L	I	I	T	G	N	G	D	V	V	Q	P	E	N	D	L	I	A	I	G	S	G	G	P	Y	A	Q	A	A	A	R	A	L	L	.	.	.	.	.	E	N	T	E	L
Query Conservation											.	.	.	.	.	.	.												.	.	.	.																																								.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.												.	.	.	.																	.	.																						.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		A	D	R	L	G	Q	Y	V	Q	A	H	T	L	Y	N	S	V	R	P	F	G	V	S	T	I	F	G	G	V	D	K	N	G	A	H	L	Y	M	L	E	P	S	G	S	Y	W	G	.	.	Y	K	G	A	A	T	G	K	G	R	Q	S	A	K	A	E	L	E	K	L	V	D	H	H	P	E	G	L	S	A	R
Template Known Secondary structure												T	T	S		T	T	S				S										T	T									T	T	S					.	.		S					S	T	T														T		T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	R	E	I	A	E	K	A	L	D	I	A	G	D	I	C	I	Y	T	N	H	F	H	T	I	E	E	L	S	Y	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	V	K	Q	A	A	K	I	I	Y	L	A	H	E	D	N	K	E	K	D	F	E	L	E	I	S	W	C	S	L	S	E
Template Known Secondary structure															G	G	G	S	T	T	S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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