Job Description P0A7B8 Confidence 100.00% Date Thu Jan 5 11:05:18 GMT 2012 Rank 13 Aligned Residues 172 % Identity 16% Template c2zcyM_ PDB info PDB header:hydrolase Chain: M: PDB Molecule:proteasome component pre4; PDBTitle: yeast 20s proteasome:syringolin a-complex Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		T	T	I	V	S	V	R	R	N	G	H	V	V	I	A	G	D	G	Q	A	T	L	G	N	T	V	M	K	G	N	V	K	K	V	R	R	L	Y	N	D	K	V	I	A	G	F	A	G	G	T	A	D	A	F	T	L	F	E	L	F	E	R	K	L	E	M	H	Q	G	H	L	V	K	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																							.																																				.	.	.	.	.	.	.
Template Conservation																																							.
Template Sequence		T	S	V	I	S	M	K	Y	D	N	G	V	I	I	A	A	D	N	L	G	S	Y	G	S	L	L	R	F	N	G	V	E	R	L	I	P	V	.	G	D	N	T	V	V	G	I	S	G	D	I	S	D	M	Q	H	I	E	R	L	L	K	D	L	V	T	E	N	A	Y	D	N	P	L	A	D	A	E	E	A	L
Template Known Secondary structure										S	S													T	T														.	T	T	T																												T	T		T	T	T	T	T	T	T	S
Template Predicted Secondary structure																																							.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.												.	.	.	.	.																																								.	.	.	.	.	.
Query SS confidence																.	.	.	.	.												.	.	.	.	.																																								.	.	.	.	.	.
Query Sequence		A	A	V	E	L	A	K	D	W	R	T	D	R	M	.	.	.	.	.	L	R	K	L	E	A	L	L	A	V	A	.	.	.	.	.	D	E	T	A	S	L	I	I	T	G	N	G	D	V	V	Q	P	E	N	D	L	I	A	I	G	S	G	G	P	Y	A	Q	A	A	A	R	A	L	L	.	.	.	.	.	.
Query Conservation																.	.	.	.	.												.	.	.	.	.																																								.	.	.	.	.	.
Alig confidence																.	.	.	.	.												.	.	.	.	.																	.	.																						.	.	.	.	.	.
Template Conservation																																																					.	.
Template Sequence		E	P	S	Y	I	F	E	Y	L	A	T	V	M	Y	Q	R	R	S	K	M	N	P	L	W	N	A	I	I	V	A	G	V	Q	S	N	G	D	Q	F	L	R	Y	V	N	L	L	G	V	T	Y	S	.	.	S	P	T	L	A	T	G	F	G	A	H	M	A	N	P	L	L	R	K	V	V	D	R	E	S	D	I
Template Known Secondary structure																				T	T														T	T	S									T	T						.	.		S					T														S		S	G	G	G	T
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
			139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	N	T	E	L	S	A	R	E	I	A	E	K	A	L	D	I	A	G	D	I	C	I	Y	T	N	H	F	H	T	I	E	E	L	S	Y	K	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		P	K	T	T	V	Q	V	A	E	E	A	I	V	N	A	M	R	V	L	Y	Y	R	D	A	R	S	S	R	N	F	S	L	A	I	I	D	K	N	T
Template Known Secondary structure		T	T																						T	T			S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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