Return to main results Retrieve Phyre Job Id

Job DescriptionP39838
Confidence90.63%DateThu Jan 5 12:01:06 GMT 2012
Rank226Aligned Residues108
% Identity16%Templated2ayxa2
SCOP infoFlavodoxin-like CheY-like RcsC linker domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   691........700.........710.........720.........730.........740.........750.........760.........770
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  LDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFN
Query Conservation        
   
           
   
     
         
 

 
  
     
   

                  
Alig confidence 
































.













































Template Conservation       


 
 

 

 

 


   
  
   .
       






  

       


   
 
 
 
 
 
 

Template Sequence  LSGKRCWLAVRNASLCQFLETSLQRSGIVVTTY. EGQEPTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWV
Template Known Secondary structure  TTT


TTTT
.SS



TT
SS
S



SS
SS


S

TTSTT
Template Predicted Secondary structure 






.


















Template SS confidence 















































































   704.....710.........720.........730...... ...740.........750.........760.........770.........780..
 
   771........780.........790.........
Predicted Secondary structure 













Query SS confidence 




























Query Sequence  MSNAMQEAVLQLIEVQLAQEEVTESPLGG
Query Conservation    
                          
Alig confidence 




























Template Conservation   


 
 


 

 

   
       
 
Template Sequence  HSVAAPHELPALLARIYLIEMESDDPANA
Template Known Secondary structure 
SS

ST


S





S
Template Predicted Secondary structure 




Template SS confidence 




























   783......790.........800.........810.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions