Job Description P39838 Confidence 68.20% Date Thu Jan 5 12:01:06 GMT 2012 Rank 249 Aligned Residues 77 % Identity 14% Template d1n9la_ SCOP info Profilin-like PYP-like sensor domain (PAS domain) Flavin-binding PAS domain Resolution 1.90

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		363	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400											.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure														.	.																											.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																											.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	P	L	G	L	L	V	H	D	Q	E	.	.	S	N	R	T	V	I	S	N	K	I	A	D	H	L	L	P	H	L	N	L	Q	N	I	T	T	M	.	.	.	.	.	.	.	.	.	.	A	E	Q	H	Q	G	I	I	Q	A	T	I	N	N	E	L	Y	E	I	R	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.																											.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																											.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	R	H	T	F	V	V	A	D	A	T	L	P	D	C	P	L	V	Y	A	S	E	G	F	Y	A	M	T	G	Y	G	P	D	E	V	L	G	H	N	C	R	F	L	Q	G	E	G	T	D	P	K	E	V	Q	K	I	R	D	A	I	K	K	G	E	A	C	S	V	R	L	L	N	Y	R	K	D	G	T	P
Template Known Secondary structure				S								T	T	S	T	T																						T	T	S		G	G	G	G			T	T																T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
											421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	M	F	R	S	Q	V	A	P	R	T	Q	I	F	I	I	R	D	Q	D
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	W	N	L	L	T	V	T	P	I	K	T	P	D	G	R	V	S	K	F	V	G	V	Q	V	D	V	T
Template Known Secondary structure														T	T	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions