Job Description P39838 Confidence 99.68% Date Thu Jan 5 12:01:06 GMT 2012 Rank 29 Aligned Residues 155 % Identity 10% Template d1ixma_ SCOP info Sporulation response regulatory protein Spo0B Sporulation response regulatory protein Spo0B Sporulation response regulatory protein Spo0B Resolution 2.60

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		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	M	K	N	I	G	D	A	L	K	E	P	A	Q	S	L	A	E	S	A	A	K	L	N	A	P	E	S	K	Q	L	A	N	Q	A	D	V	L	V	R	L	V	D	E	I	Q	L	A	N	M	L	A	D	D	S	W	K	S	E	T	V	L	F	S	V	Q	D	L	I	D	E	V	V	P	S	V	L	P	A
Query Conservation
Alig confidence																											.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	L	G	H	S	R	H	D	W	M	N	K	L	Q	L	I	K	G	N	L	S	L	Q	K	.	.	.	.	.	.	Y	D	R	V	F	E	M	I	E	E	M	V	I	D	A	K	H	E	S	K	L	S	N	L	K	T	.	.	.	.	.	.	.	.	.	.	.	.	P	H	L	A	F	D	F	L	T	F	N
Template Known Secondary structure																								T	T		.	.	.	.	.	.																							T	T	T		.	.	.	.	.	.	.	.	.	.	.	.										G	G
Template Predicted Secondary structure																											.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.													.	.	.	.	.	.	80	.	.	.	.
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.				590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		I	K	R	K	G	L	Q	L	L	I	N	N	H	L	K	A	H	D	M	R	R	G	D	R	D	A	L	R	R	I	L	L	L	L	M	Q	Y	A	V	T	S	T	Q	L	G	K	.	.	.	I	T	L	E	V	D	Q	D	E	S	S	E	D	R	L	T	F	R	I	L	D	T	G	E	G	V	S	I	H	E	M
Query Conservation																																																.	.	.
Alig confidence																				.																												.	.	.														.
Template Conservation																				.																																												.
Template Sequence		W	K	T	H	Y	M	T	L	E	Y	E	V	L	G	E	I	K	D	.	L	S	A	Y	D	Q	K	L	A	K	L	M	R	K	L	F	H	L	F	D	Q	A	V	S	R	E	S	E	N	H	L	T	V	S	L	Q	T	D	H	P	D	R	Q	.	L	I	L	Y	L	D	F	H	G	A	F	A	D	P	S	A	F
Template Known Secondary structure		G	S			S	S								S	S				.		T	T	T																			B		T	T	S													S	S	S	S	.									S		B	S		G	G	G
Template Predicted Secondary structure																				.																																												.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	L	H	F	P	F	I	N	Q	T	Q	N	D	R	Y	G	K	A	D	P	L	A	F
Query Conservation
Alig confidence			.	.						.	.	.	.
Template Conservation			.	.						.	.	.	.
Template Sequence		D	.	.	I	M	R	F	E	.	.	.	.	I	T	S	H	E	C	L	I	E	I	G	L
Template Known Secondary structure			.	.						.	.	.	.			S	S
Template Predicted Secondary structure			.	.						.	.	.	.
Template SS confidence
		174			.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions