Return to main results Retrieve Phyre Job Id

Job DescriptionP39838
Confidence92.27%DateThu Jan 5 12:01:06 GMT 2012
Rank222Aligned Residues55
% Identity16%Templated1ew0a_
SCOP infoProfilin-like PYP-like sensor domain (PAS domain) Heme-binding PAS domain
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   343......350.........360.........370.........380.........390........
Predicted Secondary structure 













Query SS confidence 























































Query Sequence  STAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNIT
Query Conservation         
         
       
                              
Alig confidence 































.






















Template Conservation 
   
 

  

     
 
     
   
  .
 
   
               
Template Sequence  MLETEDVVRARDAHLRSILDTVPDATVVSATD. GTIVSFNAAAVRQFGYAEEEVIG
Template Known Secondary structure  TS
TT
SSTT.SB



TT
Template Predicted Secondary structure 





.










Template SS confidence 























































   125....130.........140.........150...... ...160.........170.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions