Return to main results Retrieve Phyre Job Id

Job DescriptionP39838
Confidence82.07%DateThu Jan 5 12:01:06 GMT 2012
Rank240Aligned Residues45
% Identity13%Templatec3p7nB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of light activated transcription factor el222 from2 erythrobacter litoralis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   355....360.........370.... .....380.........390.........
Predicted Secondary structure 






..






Query SS confidence 



















. .
























Query Sequence  AINEEIVSLLPLGLLVHDQE. . SNRTVISNKIADHLLPHLNLQNITT
Query Conservation       
       
      ..                         
Alig confidence 



















..
























Template Conservation 
 
       
  
 
 
    

 
   
 
   
 
    
  
 
Template Sequence  QWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGR
Template Known Secondary structure  ST
SS
TTSTT





TTS
Template Predicted Secondary structure 












Template SS confidence 














































   27..30.........40.........50.........60.........70...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions