Job Description P39838 Confidence 99.36% Date Thu Jan 5 12:01:06 GMT 2012 Rank 65 Aligned Residues 95 % Identity 13% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.							730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.															.	.	.	.	750	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	C	V	M	V	D	V	T	S	A	E	I	R	N	I	V	T	R	Q	L	E	N	W	G	A	T	C	I	T	P	D	E	R	L	I	S	.	.	.	.	.	.	Q	D	Y	D	I	F	L	T	D	N	P	S	N	L	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	L	L	L	S	D
Query Conservation																																							.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	R	I	L	V	V	D	D	D	A	S	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R	A	D	S	G	V	P	I	V	M	L	T	A
Template Known Secondary structure										S															T	T									G	G	G											S						S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.		.	.	.	.	780	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		D	E	S	G	V	R	E	I	G	P	G	Q	L	C	V	N	F	N	M	S	N	A	M	.	Q	E	A	V	L	Q	L	I	E	V	Q	L
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		K	T	D	T	V	D	V	V	L	G	L	E	S	G	A	D	D	Y	I	M	K	P	F	K	P	K	E	L	V	A	R	V	R	A	R	L
Template Known Secondary structure		T	T		S	S								T	T								S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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