Job Description P39838 Confidence 93.06% Date Thu Jan 5 12:01:06 GMT 2012 Rank 217 Aligned Residues 86 % Identity 14% Template c3luqC_ PDB info PDB header:transferase Chain: C: PDB Molecule:sensor protein; PDBTitle: the crystal structure of a pas domain from a sensory box2 histidine kinase regulator from geobacter sulfurreducens to3 2.5a Resolution 2.49 Å

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400									.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		L	R	A	I	N	E	E	I	V	S	L	L	P	L	G	L	L	V	H	D	Q	E	S	N	R	T	V	I	S	N	K	I	A	D	H	L	L	P	H	L	N	L	Q	N	I	T	T	M	.	.	.	.	.	.	.	.	A	E	Q	H	Q	G	I	I	Q	A	T	I	N	N	E	L	Y	E	I	R	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																								.																										.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																								.
Template Sequence		S	D	E	R	L	R	L	F	T	E	H	A	P	A	A	L	A	X	F	D	R	E	.	X	R	Y	L	A	V	S	R	R	W	R	E	D	Y	G	L	G	D	G	D	I	L	G	X	S	H	Y	D	I	F	P	E	I	G	E	E	W	K	S	V	H	R	R	G	L	A	G	E	V	I	R	V	E	E	D	C	F
Template Known Secondary structure												T		S	S							T	T	.		B												T	T			S	S			T	T		B						S															T	T
Template Predicted Secondary structure																								.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
																		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	R	S	Q	V	A	P	R	T	Q	I	F	I	I	R	D	Q	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	A	D	G	R	T	Q	W	L	R	W	E	V	R	P	W	Y	E	G	E	G	R	V	G	G	V	V	I	F	T	E	D	I	T
Template Known Secondary structure				T	T	S	S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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