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Job DescriptionP39838
Confidence98.44%DateThu Jan 5 12:01:06 GMT 2012
Rank163Aligned Residues95
% Identity11%Templatec3h4lB_
PDB info PDB header:dna binding protein, protein bindingChain: B: PDB Molecule:dna mismatch repair protein pms1; PDBTitle: crystal structure of n terminal domain of a dna repair protein
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   570.........580.........590.........600.........610.........620.........630. ........640..
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Query Sequence  LRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLHFPFINQT. . . . . . . QNDRYGKADPL
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Template Sequence  LTTAVKELVDNSIDANAN. . . QIEIIFKDYGLE. . SIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGE
Template Known Secondary structure  TT
S...GGGTS..
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   55....60.........70.. .......80.... .....90.........100.........110.........120.........
 
   643......650.........660.........670....
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Query Sequence  AFWLSDQLARKLGGHLNIKTRDGLGTRYSVHI
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Template Sequence  ALSSLCGI. . . . . AKLSVITTTSPPKADKLEY
Template Known Secondary structure  S.....SSSTT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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