Job Description P39838 Confidence 99.89% Date Thu Jan 5 12:01:06 GMT 2012 Rank 22 Aligned Residues 200 % Identity 13% Template c3gieA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor histidine kinase desk; PDBTitle: crystal structure of deskc_h188e in complex with amp-pcp Resolution 2.65 Å

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		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	E	V	L	V	N	K	K	L	K	Q	A	Q	R	L	Y	E	K	N	Q	Q	G	R	M	I	F	M	K	N	I	G	D	A	L	K	E	P	A	Q	S	L	A	E	S	A	A	K	L	N	A	P	E	S	K	Q	L	A	N	Q	A	D	V	L	V	R	L	V	D	E	I	Q	L	A	N	M	L	A	D	D
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		K	E	R	E	R	L	E	E	K	L	E	D	A	N	E	R	I	A	E	L	V	K	L	E	E	R	.	.	Q	R	I	A	R	D	L	E	D	T	L	G	Q	K	L	S	L	I	G	L	K	S	D	L	A	R	K	L	I	Y	K	D	P	E	Q	A	A	R	E	L	K	S	V	Q	Q	T	A	R	T	S	L	N
Template Known Secondary structure		T																										.	.																													T	T	T
Template Predicted Secondary structure																												.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	K	S	E	T	V	L	F	S	V	Q	D	L	I	D	E	V	V	P	S	V	L	P	A	I	K	R	K	G	L	Q	L	L	I	N	N	H	L	K	A	H	D	M	R	R	G	D	R	D	A	L	R	R	I	L	L	L	L	M	Q	Y	A	V	T	S	T	Q	L	G	K	I	T	L	E	V	D	Q	D	E
Query Conservation
Alig confidence																											.	.	.	.																																																			.
Template Conservation																											.	.	.	.																																																			.
Template Sequence		E	V	R	K	I	V	S	S	M	R	L	K	D	E	L	I	N	I	K	Q	I	L	E	A	A	.	.	.	.	D	I	M	F	I	Y	E	E	E	K	W	P	E	N	I	S	L	L	N	E	N	I	L	S	M	C	L	K	E	A	V	T	N	V	V	K	H	S	Q	A	K	T	C	R	V	D	I	Q	Q	L	.
Template Known Secondary structure																											.	.	.	.	T												S	S																							T	T			S										.
Template Predicted Secondary structure																											.	.	.	.																																																			.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	E	D	R	L	T	F	R	I	L	D	T	G	E	G	V	S	I	H	E	M	D	N	L	H	F	P	F	I	N	Q	T	Q	N	D	R	Y	G	K	A	D	P	L	A	F	W	L	S	D	Q	L	A	R	K	L	G	G	H	L	N	I	K	T	R	D	G	L	G	T	R	Y	S	V	H	I	K
Query Conservation
Alig confidence		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		.	.	W	K	E	V	V	I	T	V	S	D	D	G	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	G	L	L	G	M	R	E	R	L	E	F	A	N	G	S	L	H	I	D	T	.	.	E	N	G	T	K	L	T	M	A	I	P
Template Known Secondary structure		.	.	T	T										S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	T							T	.	.	T	S	S
Template Predicted Secondary structure		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
				311	.	.	.	.	.	.	.	.	320	.	.	.	.																											.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions