Job Description P39838 Confidence 89.64% Date Thu Jan 5 12:01:06 GMT 2012 Rank 227 Aligned Residues 78 % Identity 13% Template c3fg8B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein rha05790; PDBTitle: crystal structure of pas domain of rha05790 Resolution 1.80 Å

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		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.																									.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	S	L	L	P	L	G	L	L	V	H	D	Q	E	S	N	R	T	V	I	S	N	K	I	A	D	H	L	L	P	H	L	N	L	Q	N	I	T	T	M	A	E	Q	H	Q	G	I	I	Q	A	T	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		L	Y	F	Q	G	G	L	G	F	X	A	L	D	E	D	.	L	R	I	I	Y	V	N	S	G	C	L	R	H	V	R	R	S	R	D	E	L	L	G	R	V	V	T	E	V	L	P	E	T	Q	G	S	Y	F	D	A	L	C	R	K	V	L	A	T	G	R	E	Q	Q	T	R	V	D	S	L	Y	S	P	G	X
Template Known Secondary structure		S	S	S		T	T								T	T	.		B													T							T	T	S	B					S	G	G	G	T	T	S																							S	S	S	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	E	I	R	M	F	R	S	Q	V	A	P	R	T	Q	I	F	I	I	R	D	Q	D	R	E
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		T	I	E	V	T	A	A	A	D	S	G	.	.	.	A	L	V	V	H	F	R	D	V	T	A	E
Template Known Secondary structure											T	T	.	.	.										T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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