Job Description P39838 Confidence 30.37% Date Thu Jan 5 12:01:06 GMT 2012 Rank 296 Aligned Residues 79 % Identity 8% Template c3f1oB_ PDB info PDB header:transcription Chain: B: PDB Molecule:aryl hydrocarbon receptor nuclear translocator; PDBTitle: crystal structure of the high affinity heterodimer of hif22 alpha and arnt c-terminal pas domains, with an internally-3 bound artificial ligand Resolution 1.60 Å

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		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.														400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		V	S	L	L	P	L	G	L	L	V	H	D	Q	E	S	N	R	T	V	I	S	N	K	I	A	D	H	L	L	P	H	L	N	L	Q	N	I	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	E	Q	H	Q	G	I	I	Q	A	T	I	N	N	E	L	Y	E	I	R	M	F	R	S	Q	V	.
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence																.																									.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																.
Template Sequence		V	C	Q	P	T	R	F	I	S	R	H	N	I	E	.	G	I	F	T	F	V	D	H	R	C	V	A	T	V	G	Y	Q	P	Q	E	L	L	G	K	N	I	V	E	F	C	H	P	E	D	Q	Q	L	L	R	D	S	F	Q	Q	V	V	K	L	K	G	Q	V	L	S	V	M	F	R	F	R	S	K	N	Q	E
Template Known Secondary structure														T	T	.		B						T	T						S			G	G	G	T	T	T	S	B	G	G	G	G	B		T	T	T												T	T	S	T	T												T	T	S
Template Predicted Secondary structure																.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
																			427	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	R	T	Q	I	F	I	I	R	D	Q	D	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	L	W	M	R	T	S	S	F	T	F	Q	N	P	Y	S	D	E	I	E	Y	I	I	C	T	N	T	N	V	K	N
Template Known Secondary structure															T	T	S															S
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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