Job Description P39838 Confidence 99.28% Date Thu Jan 5 12:01:06 GMT 2012 Rank 102 Aligned Residues 100 % Identity 17% Template c3cg0A_ PDB info PDB header:lyase Chain: A: PDB Molecule:response regulator receiver modulated diguanylate cyclase PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding Resolution 2.15 Å

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		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720		.	.	.	.	.	.	.	.	.							730	.	.	.	.	.	.	.	.	.	740	.	.		.	.	.															.	.	.	.	750	.	.
Predicted Secondary structure																												.										.	.	.	.	.	.														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.										.	.	.	.	.	.														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	V	M	V	D	V	T	S	A	E	I	R	N	I	V	T	R	Q	L	E	N	W	G	A	T	C	.	I	T	P	D	E	R	L	I	S	.	.	.	.	.	.	Q	D	Y	D	I	F	L	T	D	N	P	S	N	.	L	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	L	L	L	S	D
Query Conservation																												.										.	.	.	.	.	.														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.										.	.	.	.	.	.														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	L	I	V	E	D	G	R	L	A	A	A	T	L	R	I	Q	L	E	S	L	G	Y	D	V	L	G	V	F	D	N	G	E	E	A	V	R	C	A	P	D	L	R	P	D	I	A	L	V	D	I	M	L	C	G	A	L	D	G	V	E	T	A	A	R	L	A	A	G	C	N	L	P	I	I	F	I	T	S
Template Known Secondary structure																								T								S	S														S						S	S			S	S	S													S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.		.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		D	E	S	G	V	R	E	I	G	P	G	Q	L	C	V	N	F	N	M	S	N	A	M	.	Q	E	A	V	L	Q	L	I	E	V	Q	L	A	Q	E	E	V	T	E
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		S	Q	D	V	E	T	F	Q	R	A	K	R	V	N	P	F	G	Y	L	A	K	P	V	A	A	D	T	L	H	R	S	I	E	M	A	I	H	K	K	K	L	E	E
Template Known Secondary structure													T	T			S					S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions