Job Description P39838 Confidence 96.31% Date Thu Jan 5 12:01:06 GMT 2012 Rank 207 Aligned Residues 238 % Identity 7% Template c3c8cB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of mcp_n and cache domains of methyl-2 accepting chemotaxis protein from vibrio cholerae Resolution 1.50 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	K	D	K	S	Y	Q	I	V	D	I	T	H	A	I	Q	K	R	V	D	N	W	R	Y	V	T	W	Q	I	Y	D	N	I	A	A	T	T	S	P	S	S	G	E	G	L	Q	E	T	R	L	K	Q	D	V	Y	Y	L	E	K	P	R	R	K	T	E	A	L	I	F	G	S	H	D	N	S	T	L	E	M
Query Conservation
Alig confidence																																														.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		L	R	S	X	V	S	D	S	V	D	E	I	V	D	G	V	S	K	T	T	A	E	V	I	N	G	R	K	S	I	A	Q	Y	A	T	S	L	I	E	N	N	P	E	P	.	.	.	.	.	D	N	V	R	T	I	I	S	Q	P	L	I	K	N	T	F	L	L	V	G	F	G	L	E	K	D	G	S	N	I	N
Template Known Secondary structure																																														.	.	.	.	.								S	S								S							T	T	T	S
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	R	M	S	T	Y	L	D	T	L	W	G	A	E	N	V	P	W	S	M	Y	Y	L	N	G	Q	D	N	S	L	V	L	I	S	T	L	P	L	K	D	L	T	S	G	F	K	E	S	T	V	S	D	I	V	D	S	R	R	A	E	M	L	Q	Q	A	N	A	L	D	E	R	E	S	F	S	N	M	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	P	S	W	N	P	G	P	T	W	D	P	R	V	R	P	W	Y	K	D	A	K	N	A	G	K	L	V	I	T	A	P	Y	A	D	S	A	S	G	E	I	L	V	S	V	A	T	P	V	K	D	S	A	T	G	Q	F	L	G	S	I	F	Y	D	V	S	L	A	E	L	A	E	L	V	N	E	V	K	L
Template Known Secondary structure		S		T	T					T	T			G	G	G	S										S	S										T	T	T														T	T	T																					T	T	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	W	Q	N	G	H	Y	F	T	L	R	T	T	F	N	Q	P	G	H	L	A	T	V	V	A	F	D	L	P	I	N	D	L	I	P	P	G	M	P	L	D	S	F	R	L	E	P	D	A	T	A	T	G	N	N	D	N	E	K	E	G	T	D	S	V	S	I	H	F	N	S	T	K	I	E	I	S	S	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	A	G	Y	V	F	I	V	S	E	D	G	T	T	I	A	H	P	K	K	E	.	.	.	.	.	F	N	G	K	P	X	S	E	F	L	G	E	S	K	I	N	V	D	T	H	Q	V	I	I	N	G	K	P	Y	A	V	S	F	S	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S								T	T		B					S	S	G	G	.	.	.	.	.	G	T	T	S	B	T					S			S				S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
																				217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.						.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	S	T	D	M	R	L	V	W	Q	V	P	Y	G	T	L	L	L	D	T	L	Q	N	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	G	E	D	W	Y	V	G	V	V	I	D	E	E	I	A	Y	A	A	L	D	E	L	R	R
Template Known Secondary structure			T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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