Job Description P39838 Confidence 96.41% Date Thu Jan 5 12:01:06 GMT 2012 Rank 206 Aligned Residues 255 % Identity 8% Template c3by9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the v. cholerae histidine kinase dctb2 sensor domain Resolution 1.70 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	N	A	W	L	K	D	K	S	Y	Q	I	V	D	I	T	H	A	I	Q	K	R	V	D	N	W	R	Y	V	T	W	Q	I	Y	D	N	I	A	A	T	T	S	P	S	S	G	E	G	L	Q	E	T	R	L	K	Q	D	V	Y	Y	L	E	K	P	R	R	K	T	E	A	L	I	F	G	S	H	D	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	Q	A	L	L	N	E	H	Q	S	Q	L	D	R	F	S	S	H	I	V	A	T	L	D	K	Y	A	H	I	P	H	L	I	S	K	D	K	E	L	V	D	A	L	L	S	A	Q	N	S	A	Q	I	D	I	T	N	R	Y	L	E	Q	V	N	E	V	I	Q	A	A	D	T	Y	L	I	D	R	F	G	N
Template Known Secondary structure		G																								T	T	T	T	T							T										T	T	T																				T		S							T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	M	T	Q	R	M	S	T	Y	L	D	T	L	W	G	A	E	N	V	P	W	S	M	Y	Y	L	N	G	Q	D	N	S	L	V	L	I	S	T	L	P	L	K	D	L	T	S	G	F	K	E	S	T	V	S	D	I	V	D	S	R	R	A	E	M	L	Q	Q	A	N	A	L	D	E	R	E	S	F	S
Query Conservation
Alig confidence							.	.																																																			.
Template Conservation							.	.																																																			.
Template Sequence		T	I	A	S	S	.	.	N	W	N	L	D	R	S	F	I	G	R	N	F	A	W	R	P	Y	F	Y	L	S	I	A	G	Q	K	S	Q	Y	F	A	L	G	S	T	S	G	Q	R	G	Y	Y	Y	A	Y	P	V	I	Y	.	A	A	E	I	L	G	V	I	V	V	K	X	D	L	S	A	I	E	Q	G	W	Q
Template Known Secondary structure						T	.	.	T	T	T	S	T	T			T	T		B		T	T	S							T	T	T	S									T	T	T														.	T	T												S						T
Template Predicted Secondary structure							.	.																																																			.
Template SS confidence
		110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	R	R	L	A	W	Q	N	G	H	Y	F	T	L	R	T	T	F	N	Q	P	G	H	L	A	T	V	V	A	F	D	L	P	I	N	D	L	I	P	P	G	M	P	L	D	S	F	R	L	E	P	D	A	T	A	T	G	N	N	D	N	E	K	E	G	T	D	S	V	S	I	H	F	N	S	T	K	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	S	S	Y	F	V	A	T	D	D	H	Q	V	V	F	X	S	S	Q	P	A	W	L	F	H	S	V	A	D	L	S	P	A	Q	L	N	D	I	R	Q	S	Q	Q	Y	L	D	S	P	I	P	S	L	G	W	Q	G	D	L	Q	A	E	Q	S	E	W	R	K	P	E	K	H	W	L	Q	D	D	Y	I	V
Template Known Secondary structure			S	S								T	T		B					S	S	G	G	G	T	T		B	S	S														T	T	T	T	T					B				B	S		T	T		S					B			T	T		S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	S	A	L	N	S	T	D	M	R	L	V	W	Q	V	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	R	P	L	P	E	L	A	L	T	I	R	V	L	S	P	K
Template Known Secondary structure							G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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