Job Description P39838 Confidence 99.36% Date Thu Jan 5 12:01:06 GMT 2012 Rank 67 Aligned Residues 100 % Identity 12% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.							730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.															.	.	.	.	750	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	C	V	M	V	D	V	T	S	A	E	I	R	N	I	V	T	R	Q	L	E	N	W	G	A	T	C	I	T	P	D	E	R	L	I	S	.	.	.	.	.	.	Q	D	Y	D	I	F	L	T	D	N	P	S	N	L	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	L	L	L	S	D
Query Conservation																																							.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	K	I	L	V	V	D	D	E	K	P	I	A	D	I	L	E	F	N	L	R	K	E	G	Y	E	V	H	C	A	H	D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	I	M	L	P	N	K	D	G	V	E	V	C	R	E	V	R	K	K	Y	D	M	P	I	I	M	L	T	A
Template Known Secondary structure										S																T								S														S						T	T		S	S	S															S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	S	G	V	R	E	I	G	P	G	Q	L	C	V	N	F	N	M	S	N	A	M	Q	E	A	V	L	Q	L	I	E	V	Q	L	A	Q	E	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	S	E	I	D	K	V	I	G	L	E	I	G	A	D	D	Y	V	T	K	P	F	S	T	R	E	L	L	A	R	V	K	A	N	L	R	R	Q	L
Template Known Secondary structure		T	T											T	T								S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions