Job Description P39838 Confidence 98.86% Date Thu Jan 5 12:01:06 GMT 2012 Rank 155 Aligned Residues 94 % Identity 14% Template c2yxbA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix Resolution 1.80 Å

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		692	.	.	.	.	.	.	.					700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.										730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																															.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																															.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	V	C	V	M	V	D	.	.	.	.	V	T	S	A	E	I	R	N	I	V	T	R	Q	L	E	N	W	G	A	T	C	I	T	P	D	E	R	L	I	S	.	.	.	.	.	.	.	.	.	Q	D	Y	D	I	F	L	T	D	N	P	S	N	L	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.	.	.	.																															.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																															.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	Y	K	V	L	V	A	K	X	G	L	D	G	H	D	R	G	A	K	V	V	A	R	A	L	R	D	A	G	F	E	V	V	Y	T	G	L	R	Q	T	P	E	Q	V	A	X	A	A	V	Q	E	D	V	D	V	I	G	V	S	I	L	N	G	A	H	L	H	L	X	K	R	L	X	A	K	L	R	E	L
Template Known Secondary structure			S									S	S	S	S															T	T								S	B													T	T		S							S	S	S																T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
						746	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.		.	.	.	.	780	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																															.
Query SS confidence		.	.	.	.																															.
Query Sequence		.	.	.	.	S	G	L	L	L	S	D	D	E	S	G	V	R	E	I	G	P	G	Q	L	C	V	N	F	N	M	S	N	A	M	.	Q	E	A	V	L	Q	L	I	E	V
Query Conservation		.	.	.	.																															.
Alig confidence		.	.	.	.																															.
Template Conservation
Template Sequence		G	A	D	D	I	P	V	V	L	G	G	T	I	P	I	P	D	L	E	P	L	R	S	L	G	I	R	E	I	F	L	P	G	T	S	L	G	E	I	I	E	K	V	R	K
Template Known Secondary structure		T		T	T	S																			T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions