Job Description P39838 Confidence 71.15% Date Thu Jan 5 12:01:06 GMT 2012 Rank 246 Aligned Residues 105 % Identity 10% Template c2wkqA_ PDB info PDB header:transferase, cell adhesion Chain: A: PDB Molecule:nph1-1, ras-related c3 botulinum toxin substrate PDBTitle: structure of a photoactivatable rac1 containing the lov22 c450a mutant Resolution 1.60 Å

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		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400											.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																	.	.																										.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Query SS confidence																	.	.																										.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Query Sequence		V	S	L	L	P	L	G	L	L	V	H	D	Q	E	S	.	.	N	R	T	V	I	S	N	K	I	A	D	H	L	L	P	H	L	N	L	Q	N	I	T	T	M	.	.	.	.	.	.	.	.	.	.	A	E	Q	H	Q	G	I	I	Q	A	T	I	N	N	E	L	Y	E	I	R	.	.	.	.	.	.	.	.
Query Conservation																	.	.																										.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Alig confidence																	.	.																										.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	R	I	E	K	N	F	V	I	T	D	P	R	L	P	D	N	P	I	I	F	A	S	D	S	F	L	Q	L	T	E	Y	S	R	E	E	I	L	G	R	N	A	R	F	L	Q	G	P	E	T	D	R	A	T	V	R	K	I	R	D	A	I	D	N	Q	T	E	V	T	V	Q	L	I	N	Y	T	K	S	G
Template Known Secondary structure		G	G	G			S							T	T	S	T	T																						T	T	S		G	G	G	G			T	T															T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
													421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	M	F	R	S	Q	V	A	P	R	T	Q	I	F	I	I	R	D	Q	D	R	E	V	L	V	N	K	K	L	K	Q	A	Q	R	L	Y	E	K	N	Q	Q	G	R	M	I	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	F	W	N	L	F	H	L	Q	P	M	R	D	Q	K	G	D	V	Q	Y	F	I	G	V	Q	L	D	G	T	E	H	V	R	D	A	A	E	R	E	G	V	M	L	I	K	K	T	A	E	N	I	D	E	A	A
Template Known Secondary structure																T	T	S													S	S
Template Predicted Secondary structure
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions