Job Description P39838 Confidence 99.25% Date Thu Jan 5 12:01:06 GMT 2012 Rank 110 Aligned Residues 98 % Identity 13% Template c2rdmB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver protein from2 sinorhizobium medicae wsm419 Resolution 1.76 Å

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		692	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.								730	.	.	.	.	.	.	.	.	.	740	.	.	.		.	.																.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.															.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.															.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	V	C	V	M	V	D	V	T	S	A	E	I	R	N	I	V	T	R	Q	L	E	N	W	G	A	T	C	I	T	P	D	E	R	L	I	S	.	.	.	.	.	.	.	Q	D	Y	D	I	F	L	T	D	N	P	S	N	L	.	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	L
Query Conservation																																								.	.	.	.	.	.	.															.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.															.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	V	T	I	L	L	A	D	D	E	A	I	L	L	L	D	F	E	S	T	L	T	D	A	G	F	L	V	T	A	V	S	S	G	A	K	A	I	E	X	L	K	S	G	A	A	I	D	G	V	V	T	D	I	R	F	C	Q	P	P	D	G	W	Q	V	A	R	V	A	R	E	I	D	P	N	X	P	I	V
Template Known Secondary structure											S															T	T							S	S										T	T										S			S	S	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		749	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.		.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		L	L	S	D	D	E	S	G	V	R	E	I	G	P	G	Q	L	C	V	N	F	N	M	S	N	A	M	.	Q	E	A	V	L	Q	L	I	E	V	Q	L	A	Q	E	E
Query Conservation																													.
Alig confidence															.	.													.
Template Conservation															.	.
Template Sequence		Y	I	S	G	H	A	A	L	E	W	A	S	N	.	.	G	V	P	D	S	I	I	L	E	K	P	F	T	S	A	Q	L	I	T	A	V	S	Q	L	L	N	A	R	E
Template Known Secondary structure					S	S		S	T	T					.	.	S		T	T						S	S																T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions