Job Description P39838 Confidence 98.78% Date Thu Jan 5 12:01:06 GMT 2012 Rank 157 Aligned Residues 100 % Identity 14% Template c2qsjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-binding response regulator, luxr family; PDBTitle: crystal structure of a luxr family dna-binding response2 regulator from silicibacter pomeroyi Resolution 2.10 Å

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		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.			.	.	.	720	.	.	.	.	.	.	.	.	.								730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.										.	.	.	.	750	.	.	.	.	.	.
Predicted Secondary structure																								.	.														.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.														.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		C	V	M	V	D	V	T	S	A	E	I	R	N	I	V	T	R	Q	L	E	N	W	.	.	G	A	T	C	I	T	P	D	E	R	L	I	S	.	.	.	.	.	.	.	Q	D	Y	D	I	F	L	T	D	N	P	S	N	L	T	A	.	.	.	.	.	.	.	.	.	S	G	L	L	L	S	D	D	E	S	G
Query Conservation																								.	.														.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.														.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																																																																															.	.
Template Sequence		V	V	L	I	V	D	D	H	H	L	I	R	A	G	A	K	N	L	L	E	G	A	F	S	G	M	R	V	E	G	A	E	T	V	S	D	A	L	A	F	L	E	A	D	N	T	V	D	L	I	L	L	D	V	A	I	D	G	L	V	R	L	K	R	F	D	P	S	N	A	V	A	L	I	S	G	E	.	.	H
Template Known Secondary structure								S																	T	T							S	S										T	T				S																			T	T	S									.	.
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.		.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		V	R	E	I	G	P	G	Q	L	C	V	N	F	N	M	S	N	A	M	.	Q	E	A	V	L	Q	L	I	E	V	Q	L	A	Q	E	E	V	T	E	S	P
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		E	L	I	R	A	A	L	E	A	G	A	D	G	F	I	P	K	S	A	D	P	Q	V	L	I	H	A	V	S	L	I	L	E	G	E	I	F	L	P	R	S
Template Known Secondary structure										T	T		S	B				T	T	S														T	T			B			S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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