Job Description P39838 Confidence 100.00% Date Thu Jan 5 12:01:06 GMT 2012 Rank 3 Aligned Residues 241 % Identity 15% Template c2q8fA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1 Resolution 2.03 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.															490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	E	V	L	V	N	K	K	L	K	Q	A	Q	R	L	Y	E	K	N	Q	Q	G	R	M	I	F	M	K	N	I	G	D	A	L	K	E	P	A	Q	S	L	A	E	S	A	A	K	L	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	S	K	Q	L	A	N	Q	A	D	V	L	V	R
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	W	Y	I	Q	S	L	Q	E	L	L	D	F	K	D	K	S	A	E	D	A	K	A	I	Y	D	F	T	D	T	V	I	R	I	R	N	R	H	N	D	V	I	P	T	M	A	Q	G	V	I	E	Y	K	E	S	F	D	P	V	T	S	Q	N	V	Q	Y	F	L	D	R	F	Y	M	S	R	I	S	I	R	M
Template Known Secondary structure												G	G	G	T	T	S		T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.								.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		L	V	D	E	I	Q	L	A	N	M	L	A	D	D	S	W	K	S	E	T	V	L	F	S	V	Q	D	L	I	D	E	V	V	P	S	V	L	P	A	I	K	R	.	.	.	.	.	.	.	K	G	L	Q	L	L	I	N	N	H	L	K	A	H	D	M	R	R	G	D	R	D	A	L	R	R	I	L	L	L	L
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence												.	.	.	.																													.	.	.	.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		L	L	N	Q	H	S	L	L	F	G	.	.	.	.	H	I	G	S	I	N	P	N	C	N	V	L	E	V	I	K	D	G	Y	E	N	A	R	R	L	C	D	L	Y	Y	I	N	S	P	E	L	E	L	E	E	L	N	A	K	S	P	G	Q	P	I	Q	V	V	Y	V	P	S	H	L	Y	H	M	V	F	E	L
Template Known Secondary structure												.	.	.	.		B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		578	.	580	.	.	.	.	.									.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.							.		630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																																												.	.	.	.	.	.		.
Query SS confidence										.	.	.	.	.	.	.	.																																												.	.	.	.	.	.		.
Query Sequence		M	Q	Y	A	V	T	S	T	.	.	.	.	.	.	.	.	Q	L	G	K	I	T	L	E	V	D	Q	D	E	S	S	E	D	R	L	T	F	R	I	L	D	T	G	E	G	V	S	I	H	E	M	D	N	L	H	F	P	F	I	.	.	.	.	.	.	N	.	Q	T	Q	N	D	R	Y	G	K	A	D	P	L
Query Conservation										.	.	.	.	.	.	.	.																																												.	.	.	.	.	.		.
Alig confidence										.	.	.	.	.	.	.	.													.	.	.																													.	.	.	.	.	.		.
Template Conservation																														.	.	.
Template Sequence		F	K	N	A	M	R	A	T	M	E	H	H	A	N	R	G	V	Y	P	P	I	Q	V	H	V	T	L	G	.	.	.	N	E	D	L	T	V	K	M	S	D	R	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	T	A	P	R	P	R	V	E	T	S	R	A	V	P	L	A	G	F	G	Y
Template Known Secondary structure													S	T	T	T	T													.	.	.	S	S										S									G	G	G	G		T	T	T	T							S	S			S				S	S		T	T
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	W	L	S	D	Q	L	A	R	K	L	G	G	H	L	N	I	K	T	R	D	G	L	G	T	R	Y	S	V	H	I	K	M	L	A	A	D	P	E	V	E	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	P	I	S	R	L	Y	A	Q	Y	F	Q	G	D	L	K	L	Y	S	L	E	G	Y	G	T	D	A	V	I	Y	I	K	A	L	S	T	D	S	I	E	R	L	P
Template Known Secondary structure													T	T									T	T	T										S	S	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions