Job Description P39838 Confidence 83.27% Date Thu Jan 5 12:01:06 GMT 2012 Rank 239 Aligned Residues 85 % Identity 12% Template c2l4rA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 2; PDBTitle: nmr solution structure of the n-terminal pas domain of herg Resolution UNK

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		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400													.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																				.	.																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																				.	.																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		N	E	E	I	V	S	L	L	P	L	G	L	L	V	H	D	Q	E	.	.	S	N	R	T	V	I	S	N	K	I	A	D	H	L	L	P	H	L	N	L	Q	N	I	T	T	M	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Q	H	Q	G	I	I	Q	A	T	I	N	N	E	L	Y	E	I	R	.	.
Query Conservation																				.	.																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																				.	.																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		I	I	R	K	F	E	G	Q	S	R	K	F	I	I	A	N	A	R	V	E	N	C	A	V	I	Y	C	N	D	G	F	C	E	L	C	G	Y	S	R	A	E	V	M	Q	R	P	C	T	C	D	F	L	H	G	P	R	T	Q	R	R	A	A	A	Q	I	A	Q	A	L	L	G	A	E	E	R	K	V	E	I	A
Template Known Secondary structure		T								S								T	T		S	S	S	S		S											T							T	T			T	T		G	G	G			T	T	S															T		S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
																			421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	R	S	Q	V	A	P	R	T	Q	I	F	I	I	R	D	Q	D	R	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Y	R	K	D	G	S	C	F	L	C	L	V	D	V	V	P	V	K	N	E	D	G	A	V	I	M	F	I	L	N	F	E	V	V	M	E	K
Template Known Secondary structure					T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions