Job Description P39838 Confidence 97.10% Date Thu Jan 5 12:01:06 GMT 2012 Rank 199 Aligned Residues 78 % Identity 15% Template c1zxnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme; PDBTitle: human dna topoisomerase iia atpase/adp Resolution 2.51 Å

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		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.			.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.													.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	R	I	L	L	L	L	M	Q	Y	A	V	T	S	T	Q	L	G	.	.	K	I	T	L	E	V	D	Q	D	E	S	S	E	D	R	L	T	F	R	I	L	D	T	G	E	G	V	S	I	H	.	.	.	.	.	.	.	.	.	.	.	.	E	M	D	N	L	H	F	P	F	I	N	Q	T	Q	N	D	R
Query Conservation																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.													.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.
Template Sequence		L	Y	K	I	F	D	E	I	L	V	N	A	A	D	N	K	Q	R	D	P	K	M	S	C	I	R	V	T	I	D	P	E	N	.	.	.	N	L	I	S	I	W	N	N	G	K	G	I	P	V	V	E	H	K	V	E	K	M	Y	V	P	A	L	I	F	G	Q	L	L	T	S	S	N	Y	D	D	D	E	K	K
Template Known Secondary structure																G	G	G	T		T	T										T	T	T	.	.	.	T								S	S					S			T	T	T	T										S	S	S			S				G	G	G
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		636	.	.	.	640		.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		Y	G	K	A	D	.	P	L	A	F	W	L	S	D	Q	L
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		V	T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F
Template Known Secondary structure				S			S	S									T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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