Job Description P39838 Confidence 96.63% Date Thu Jan 5 12:01:06 GMT 2012 Rank 204 Aligned Residues 78 % Identity 15% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

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		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.			.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.									.	620	.	.	.	.	.	.	.						.	.	630	.	.	.	.
Predicted Secondary structure																		.	.																																		.	.	.	.	.	.	.	.										.	.	.	.	.
Query SS confidence																		.	.																																		.	.	.	.	.	.	.	.										.	.	.	.	.
Query Sequence		L	R	R	I	L	L	L	L	M	Q	Y	A	V	T	S	T	.	.	Q	L	G	K	I	T	L	E	V	D	Q	D	E	S	S	E	D	R	L	T	F	R	I	L	D	T	G	E	G	V	S	I	H	.	.	.	.	.	.	.	.	E	M	D	N	L	H	F	P	F	.	.	.	.	.	I	N	Q	T	Q	N	D
Query Conservation																		.	.																																		.	.	.	.	.	.	.	.										.	.	.	.	.
Alig confidence																		.	.																.	.	.																.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation																																			.	.	.
Template Sequence		L	F	K	I	F	D	E	I	L	V	N	A	A	D	N	K	V	R	D	P	S	M	K	R	I	D	V	N	I	H	A	E	E	.	.	.	H	T	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T	S	S	N	Y	D	D	D	E	K	K
Template Known Secondary structure																					T	T										T	T	T	.	.	.	T								S	S					S	B		T	T	T		S	B								S	S	S			S				T	T	S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	G	K	A	D	P	L	A	F	W	L	S	D	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F
Template Known Secondary structure				S			S	S									T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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