Job Description P39838 Confidence 97.58% Date Thu Jan 5 12:01:06 GMT 2012 Rank 187 Aligned Residues 123 % Identity 12% Template c1ei1B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna gyrase b; PDBTitle: dimerization of e. coli dna gyrase b provides a structural mechanism2 for activating the atpase catalytic center Resolution 2.30 Å

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		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.		.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.									620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure																					.																																.	.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																					.																																.	.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		L	R	R	I	L	L	L	L	M	Q	Y	A	V	T	S	T	Q	L	G	.	K	I	T	L	E	V	D	Q	D	E	S	S	E	D	R	L	T	F	R	I	L	D	T	G	E	G	V	S	I	H	E	.	.	.	.	.	.	.	.	M	D	N	L	H	F	P	F	I	N	Q	T	Q	N	D	R	.	.	.	.	.
Query Conservation																					.																																.	.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																					.														.	.	.	.															.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		L	H	H	M	V	F	E	V	V	D	N	A	I	D	E	A	L	A	G	H	C	K	E	I	I	V	T	I	H	A	D	N	S	.	.	.	.	V	S	V	Q	D	D	G	R	G	I	P	T	G	I	H	P	E	E	G	V	S	A	A	E	V	I	M	T	V	L	H	A	G	G	K	F	D	D	N	S	Y	K	V
Template Known Secondary structure																			T	T											T	T	S		.	.	.	.							S	S					S	B		T	T	T	S	S	B								S	T	T		S	S		S	S	S	S	S		S	S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.					.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	K	A	D	P	L	A	F	W	L	S	D	Q	L	A	R	K	L	G	G	H	L	N	I	K	T	R	D	G	L	G	T	R	Y	S	V	H	I	K	M	L	A	A	D	P	E	V	E	E	E	E	E	R	L	L	D	D	V	C	V	M	V	D	V	T
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		S	G	G	L	H	G	V	G	V	S	V	V	N	A	L	S	.	.	.	.	.	Q	K	L	E	L	V	I	Q	R	E	G	K	I	H	R	Q	I	Y	E	H	G	V	P	Q	A	P	L	A	V	T	G	E	T	E	K	T	G	T	M	V	R	F	W	P	S
Template Known Secondary structure			S			S	S									T		.	.	.	.	.										T	T									T	T			S	S									S
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.						.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions