Job Description P39838 Confidence 97.98% Date Thu Jan 5 12:01:06 GMT 2012 Rank 171 Aligned Residues 105 % Identity 14% Template c1ea6A_ PDB info PDB header:dna repair Chain: A: PDB Molecule:pms1 protein homolog 2; PDBTitle: n-terminal 40kda fragment of nhpms2 complexed with adp Resolution 2.7 Å

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		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	R	R	I	L	L	L	L	M	Q	Y	A	V	T	S	T	Q	L	G	K	I	T	L	E	V	D	Q	D	E	S	S	E	D	R	L	T	F	R	I	L	D	T	G	E	G	V	S	I	H	E	M	D	N	L	H	F	P	F	I	N	Q	T	Q	N	D	R	Y	G	K	A	D	P	L	A	F	W	L	S	D
Query Conservation
Alig confidence																					.	.	.														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	S	T	A	V	K	E	L	V	E	N	S	L	D	A	G	A	T	.	.	.	N	I	D	L	K	L	K	D	Y	G	V	D	L	.	.	I	E	V	S	D	N	G	C	G	V	E	E	E	N	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	L	E	A	L	S	S	L	C
Template Known Secondary structure		S															T	T		S	.	.	.								T	T	T	T	S		.	.							S					T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																					.	.	.														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																	.	.	.	.	.	.	.	.	90	.	.
		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	R	K	L	G	G	H	L	N	I	K	T	R	D	G	L	G	T	R	Y	S	V	H	I	K	M	L	A	A	D	P	E	V	E	E	E	E	E	R	L	L	D	D	V	C	V	M	V	D	V
Query Conservation
Alig confidence				.	.	.	.	.										.
Template Conservation				.	.	.	.	.										.
Template Sequence		A	L	.	.	.	.	.	S	D	V	T	I	S	T	C	H	.	A	S	A	K	V	G	T	R	L	M	F	D	H	N	G	K	I	I	Q	K	T	P	Y	P	R	P	R	G	T	T	V	S	V	Q	Q
Template Known Secondary structure				.	.	.	.	.	S									.	T	T		S	S								T	T	S												S								S
Template Predicted Secondary structure				.	.	.	.	.										.
Template SS confidence
		116	.						.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions