Job Description Q47537 Confidence 97.74% Date Thu Jan 5 12:36:50 GMT 2012 Rank 80 Aligned Residues 98 % Identity 10% Template d2hava1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.														.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	L	V	V	K	K	T
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.
Template Sequence		V	N	S	V	G	K	I	E	C	V	S	A	E	T	T	E	D	C	I	A	K	I	M	N	G	E	A	D	A	M	S	L	D	G	G	F	V	Y	I	A	G	K	C	G	.	.	L	V	P	V	L	A	E	N	Y	N	K	S	D	N	C	E	D	T	P	E	A	G	Y	F	A	V	A	V	V	K	K	S	A	S
Template Known Secondary structure					T	T	S							S	S											T	S																	T	T	.	.										S	S	T	T	S	G	G	G														T	T	S	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.			.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	.	.	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		D	L	T	W	D	N	L	K	G	K	K	S	C	H	T	A	V	G	R	T	A	G	W	N	I	P	M	G	L	L	Y	N	K	I	N
Template Known Secondary structure		S			G	G	G		T	T						S		T	T		T	T	T	T							G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions