Job Description Q47537 Confidence 76.67% Date Thu Jan 5 12:36:50 GMT 2012 Rank 161 Aligned Residues 200 % Identity 12% Template d2esna2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.10

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		Q	A	Q	A	V	N	V	T	V	A	Y	Q	T	S	A	E	P	A	K	V	A	Q	A	D	N	T	F	A	K	E	S	.	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L
Query Conservation																																	.
Alig confidence																																	.												.
Template Conservation																																													.
Template Sequence		G	Q	S	Q	R	T	F	V	F	A	A	T	D	Y	T	A	F	A	L	L	P	P	L	M	N	R	L	Q	H	S	A	P	G	V	R	L	R	L	V	N	A	E	R	.	K	L	S	V	E	A	L	A	S	G	R	I	D	F	A	L	G	Y	D	E	E	H	E	R	L	P	E	G	I	Q	A	H	D	W	F	A
Template Known Secondary structure		T	T																													S	T	T									S	S	.	S									T	S	S	S							S	T	T					T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	K	L	G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A	Y	V	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	Y	V	V	V	A	R	R	D	H	P	R	L	A	G	A	P	T	L	E	G	Y	L	A	E	R	H	A	V	V	T	P	W	N	E	D	S	G	V	I	D	R	L	L	A	R	S	G	L	R	R	E	V	A	V	Q	L	P	T	V	L	A	A	L	F	L	A	G	S	T	D	F	L	L	T	A	P	R	H
Template Known Secondary structure										S	S		T	T		S	S	S								T	S							T	T			S	S										T	T										S											T	S	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	V	N	A	L	E	K	D	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K
Query Conservation
Alig confidence												.	.	.																					.	.	.	.
Template Conservation												.	.	.																					.	.	.	.
Template Sequence		A	A	R	A	L	A	E	A	A	G	.	.	.	L	A	L	Y	P	A	P	F	D	I	P	P	Y	V	L	R	L	Y	S	H	.	.	.	.	V	Q	G	R	D	A	H	A	W	M	I	G
Template Known Secondary structure											T	.	.	.							S	S													.	.	.	.
Template Predicted Secondary structure												.	.	.																					.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions