Job Description Q47537 Confidence 99.91% Date Thu Jan 5 12:36:50 GMT 2012 Rank 24 Aligned Residues 260 % Identity 13% Template d2czla1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.55

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		N	V	T	V	A	Y	Q	T	S	A	E	P	A	K	V	A	Q	A	.	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L
Query Conservation																				.
Alig confidence										.										.							.								.
Template Conservation										.																	.								.
Template Sequence		A	L	R	L	G	F	S	P	.	P	N	D	T	F	I	F	Y	A	L	V	H	G	R	V	E	.	S	P	V	P	L	E	P	.	V	L	E	D	V	E	T	L	N	R	W	A	L	E	G	R	L	P	L	T	K	L	S	Y	A	A	Y	A	Q	V	R	D	R	Y	V	A	L	R	S	G	G	A	L	G	R	G
Template Known Secondary structure										.												T	T	S	S		.		S	S					.														T	T			S										T	T		T	T	T					S	S	S					S	S
Template Predicted Secondary structure										.																	.								.
Template SS confidence
		3	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A
Query Conservation
Alig confidence										.	.	.	.																														.	.	.	.	.	.
Template Conservation										.	.	.	.																														.	.	.	.	.	.
Template Sequence		V	G	P	L	V	V	A	R	.	.	.	.	G	P	L	Q	A	L	E	G	L	R	V	A	V	P	G	R	H	T	T	A	Y	F	L	L	S	L	Y	A	Q	.	.	.	.	.	.	G	F	V	P	V	E	V	R	Y	D	R	I	L	P	M	V	A	Q	G	E	V	E	A	G	L	I	I	H	E	S	R	F	T
Template Known Secondary structure									S	.	.	.	.	S			S			T	T						S		T	T	S											S	.	.	.	.	.	.	S								G	G	G							T	T	S	S	S						T	T
Template Predicted Secondary structure										.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.
Predicted Secondary structure																				.	.	.	.																																																									.
Query SS confidence																				.	.	.	.																																																									.
Query Sequence		L	E	K	D	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G	.	.	.	.	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D	A	Q	Q	P	Y	I	A	N	P	D	V	W	L	K	Q	P	E	N	I	S	K	L	A	R	L	S	.	G
Query Conservation																				.	.	.	.																																																									.
Alig confidence																				.	.	.	.																											.	.	.												.	.	.	.	.	.											.
Template Conservation																																																		.	.	.												.	.	.	.	.	.
Template Sequence		Y	P	R	Y	G	L	V	Q	V	V	D	L	G	A	W	W	E	E	R	T	G	L	P	L	P	L	G	A	I	L	A	R	R	D	L	G	E	G	L	I	R	A	L	D	E	A	V	R	.	.	.	R	S	V	A	Y	A	L	A	H	P	E	.	.	.	.	.	.	E	A	L	D	Y	M	R	A	H	A	Q	E
Template Known Secondary structure		G	G	G	G	T																S	S											G	G	G														.	.	.									S	G	G	.	.	.	.	.	.	G	G									T	T
Template Predicted Secondary structure																																																		.	.	.												.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	E	G	D	V	P	G	L	V	K	G	N	T	Y	L	T	P	Q	Q	Q	T	A	E	L	T	G	P	V	N	K	A	I	I	D	T	A	Q	F	L	K	E	Q	G	K	V	P	A	V	A	N	D
Query Conservation
Alig confidence																	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		L	S	D	E	V	I	W	A	H	V	H	T	Y	V	N	.	.	.	.	A	F	S	L	D	V	G	E	E	G	E	R	A	V	A	R	L	F	A	E	A	E	A	R	G	L	A	A	P	S	P	R	P
Template Known Secondary structure		S														S	.	.	.	.																								T	T	S	S				S	S
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions