Job Description Q47537 Confidence 98.06% Date Thu Jan 5 12:36:50 GMT 2012 Rank 57 Aligned Residues 193 % Identity 9% Template d2a5sa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.											60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																																					.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.																																																					.
Query Sequence		F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	.	.	.	.	.	.	.	.	.	.	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	S	E	A	L	V	V	K	.	K	T
Query Conservation																	.	.	.	.	.	.	.	.	.	.																																																					.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																											.										.	.															.
Template Conservation																																																					.										.	.
Template Sequence		L	S	R	T	V	K	F	T	Y	D	L	Y	L	V	T	N	G	K	H	G	K	K	V	N	N	V	W	N	G	M	I	G	E	V	V	Y	Q	R	A	V	M	A	V	G	S	L	T	I	N	E	E	.	R	S	E	V	V	D	F	S	V	.	.	P	F	V	E	T	G	I	S	V	M	V	S	R	Q	V	T	G
Template Known Secondary structure							T										S	S	S	S					T	T											T	T	S		S				S	S		B					.			T	T						.	.																	S
Template Predicted Secondary structure																																																					.										.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		114	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		I	S	K	P	E	D	L	I	.	.	.	.	.	.	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																																		.	.
Template Conservation																																																	.	.
Template Sequence		L	S	D	K	K	F	Q	R	P	H	D	Y	S	P	P	F	R	F	G	T	V	P	N	G	S	T	E	R	N	I	R	N	N	Y	P	Y	M	H	Q	Y	M	T	R	F	N	Q	R	.	.	G	V	E	D	A	L	V	S	L	K	T	G	K	L	D	A	F	I	Y	D	A	A	V	L	N	Y	K	A	G	R	D
Template Known Secondary structure		T	T	S					S	G	G	G	S	S	S								T	T	S								T	T									G	G	G			S	.	.	S										T	T	S		S															T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D	A	Q	Q	P	Y	I	A	N	P	D	V	W	L	K	Q	P	E	N	I	S	K	L	A	R	L	S	G
Query Conservation
Alig confidence																											.	.	.				.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																											.	.	.				.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		E	G	C	K	L	V	T	I	G	S	G	Y	I	F	A	T	T	G	Y	G	I	A	L	Q	K	.	.	.	G	S	P	.	.	.	.	.	W	K	R	Q	I	D	L	A	L	L	Q	F	V	G	D	G	.	.	.	.	.	.	.	E	M	E	E	L	E	T	L	W	L	T
Template Known Secondary structure		T	T	S										G	G	G										T	.	.	.	T		T	.	.	.	.	.	T															T	.	.	.	.	.	.	.										T
Template Predicted Secondary structure																											.	.	.				.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.						.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270								.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions