Job Description Q47537 Confidence 97.81% Date Thu Jan 5 12:36:50 GMT 2012 Rank 72 Aligned Residues 161 % Identity 17% Template d1z7me1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.90

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	.	P	I	E	V	F	L	L	A	S	K	L	G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P
Query Conservation																																												.
Alig confidence										.	.	.																										.	.	.				.																																				.	.
Template Conservation										.	.	.																										.	.	.																																								.	.
Template Sequence		D	L	Q	I	I	F	G	K	.	.	.	P	N	D	V	I	T	F	L	E	H	G	I	V	D	I	G	F	V	G	K	D	T	L	D	E	.	.	.	N	D	F	D	D	Y	Y	E	L	L	Y	L	K	I	G	Q	C	I	F	A	L	A	S	Y	P	D	F	S	N	K	N	F	Q	R	H	K	R	I	A	.	.
Template Known Secondary structure		S								.	.	.										T	T	S		S												.	.	.	S	S											T	T											G	G	G	G	G				S	S						.	.
Template Predicted Secondary structure										.	.	.																										.	.	.																																								.	.
Template SS confidence
		43	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V
Query Conservation
Alig confidence		.	.																	.	.	.											.																																					.	.	.	.	.	.
Template Conservation		.	.																	.	.	.											.																																					.	.	.	.	.	.
Template Sequence		.	.	S	K	Y	P	R	V	T	K	K	Y	F	A	Q	K	Q	E	.	.	.	D	I	E	I	I	K	L	E	G	S	.	V	E	L	G	P	V	V	G	L	A	D	A	I	V	D	I	V	E	T	G	N	T	L	S	A	N	G	L	E	V	I	E	K	I	S	D	.	.	.	.	.	.	I	S	T	R	M	I
Template Known Secondary structure		.	.		S												T	T		.	.	.								S	S		.	T	T					T	T	S		S							S	S	S					T	T	T										.	.	.	.	.	.
Template Predicted Secondary structure		.	.																	.	.	.											.																																					.	.	.	.	.	.
Template SS confidence
				115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	K	S	S	F	K	F	K	K	D	K	I	I	E	M	V	E	R	L	E	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions