Job Description Q47537 Confidence 97.75% Date Thu Jan 5 12:36:50 GMT 2012 Rank 79 Aligned Residues 212 % Identity 13% Template d1wdna_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.94

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		24	.	.	.	.	.	30	.	.	.	.	.	.										.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.						.
Query SS confidence															.	.	.	.	.	.	.	.	.						.
Query Sequence		N	V	T	V	A	Y	Q	T	S	A	E	P	A	.	.	.	.	.	.	.	.	.	K	V	A	Q	A	.	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I
Query Conservation															.	.	.	.	.	.	.	.	.						.
Alig confidence															.	.	.	.	.	.	.	.	.						.																		.
Template Conservation																																															.
Template Sequence		K	L	V	V	A	T	D	T	A	F	V	P	F	E	F	K	Q	G	D	L	Y	V	G	F	D	V	D	L	W	A	A	I	A	K	E	L	K	L	D	Y	E	L	K	P	M	.	D	F	S	G	I	I	P	A	L	Q	T	K	N	V	D	L	A	L	A	G	I	T	I	T	D	E	R	K	K	A	I	D	F	S
Template Known Secondary structure									S	S	B	T	T	T	B				T	T				S														T									.		G	G	G							T	T	S	S	S														T	T	S
Template Predicted Secondary structure																																															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	F	L	L	A	S	K	L	G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A
Query Conservation
Alig confidence												.	.																																				.	.	.	.	.	.
Template Conservation												.	.																																				.	.	.	.	.	.
Template Sequence		D	G	Y	Y	K	S	G	L	L	V	.	.	M	V	K	A	N	N	N	D	V	K	S	V	K	D	L	D	G	K	V	V	A	V	K	S	G	T	G	S	V	D	Y	A	K	A	N	.	.	.	.	.	.	I	K	T	K	D	L	R	Q	F	P	N	I	D	N	A	Y	M	E	L	G	T	N	R	A	D	A	V
Template Known Secondary structure		S										.	.				T	T			S		S	S	S	T	T	T	T	T							T	T	S										.	.	.	.	.	.				S						S	S										T	T	S		S
Template Predicted Secondary structure												.	.																																				.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D	A	Q	Q	P	Y	I	A	N	P	D	V	W	L	K	Q	P	E	N	I	S	K	L	A
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		L	H	D	T	P	N	I	L	Y	F	I	K	T	A	G	N	G	Q	F	K	A	V	G	D	S	L	E	A	Q	Q	Y	G	I	A	F	P	K	G	S	.	.	.	.	.	.	.	.	.	D	E	L	R	D	K	V	N	G	A	L	K	T	L	R	E	N	G	.	.	.	.	.	.	.	T	Y	N	E	I	Y	K
Template Known Secondary structure														T	T	T	T	T	T																			T	T		.	.	.	.	.	.	.	.	.																	T	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.										.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.	.	.
		254	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	G	V	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	W	F	G	T	E	P
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions