Job Description Q47537 Confidence 97.59% Date Thu Jan 5 12:36:50 GMT 2012 Rank 89 Aligned Residues 164 % Identity 16% Template d1ve4a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		45	.	.	.	.	50	.													.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	K	E	S	G	A	.	.	.	.	.	.	.	.	.	.	.	.	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	S	E	A	L	V	V	K	K
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.										.																							.	.	.
Template Conservation																														.																							.	.	.
Template Sequence		V	L	K	R	A	G	L	D	L	P	E	V	L	L	H	G	K	E	G	G	V	A	L	L	E	L	R	N	.	K	D	V	P	I	Y	V	D	L	G	I	A	E	I	G	V	V	G	K	D	V	L	.	.	.	L	D	S	G	R	D	L	F	E	P	V	D	L	G	F	G	A	C	R	L	S	L	I	R	R	P
Template Known Secondary structure						T	T												T	T	S								G	.	G	G							T	T	S	S	S										.	.	.					S											S										T
Template Predicted Secondary structure																														.																							.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	L	T	D
Query Conservation
Alig confidence			.	.	.	.										.	.	.	.																		.	.	.								.
Template Conservation			.	.	.	.										.	.	.	.																		.	.	.								.
Template Sequence		G	.	.	.	.	D	T	G	P	I	R	R	V	A	.	.	.	.	T	K	Y	P	N	F	T	A	R	L	L	K	E	R	G	W	A	.	.	.	A	D	V	V	E	L	S	.	G	N	I	E	L	A	A	V	T	G	L	A	D	A	V	V	D	V	V	Q	T	G	A	T	L	R	A	A	G	L	V	E	V	E
Template Known Secondary structure		T	.	.	.	.			S							.	.	.	.		S												T	T			.	.	.							S	.	S		T						T	T	S	S	S							S	S	S						T	T
Template Predicted Secondary structure			.	.	.	.										.	.	.	.																		.	.	.								.
Template SS confidence
		103					.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D
Query Conservation
Alig confidence						.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.
Template Sequence		V	L	A	H	.	.	.	.	.	.	S	T	A	R	L	V	V	N	R	Q	A	L	K	L	K	R	A	V	L	K	P	L	I	Q	R	L	R	E
Template Known Secondary structure						.	.	.	.	.	.															T
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		171	.	.	.							.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions