Job Description Q47537 Confidence 97.39% Date Thu Jan 5 12:36:50 GMT 2012 Rank 93 Aligned Residues 115 % Identity 17% Template d1tfda_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.30

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.
Query Sequence		P	A	K	V	A	Q	A	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	S	.	.	.	.	.	.	.	.	E
Query Conservation																																																																									.	.	.	.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	A	N	F	R	D	S	M	K	K	V	L	P	E	D	G	P	R	I	I	C	V	K	K	A	S	Y	L	D	C	I	K	A	I	A	A	H	E	A	D	A	V	T	L	D	A	G	L	V	H	E	A	G	L	T	P	N	N	L	K	P	V	V	A	E	F	Y	G	S	K	E	N	P	K	T	F	Y	Y	A	V
Template Known Secondary structure										T	T	T	S		S	S	S									S	S										T	T	S			B													T	T	T	T											S		S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	.	.	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		A	L	V	K	K	G	S	N	F	Q	L	N	E	L	Q	G	K	K	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	L	L	Y	C	D	L	P	E	P	R
Template Known Secondary structure						T	T					T	T			T	T						S		T	T		T	T	T	T								T	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions