Job Description Q47537 Confidence 96.48% Date Thu Jan 5 12:36:50 GMT 2012 Rank 105 Aligned Residues 169 % Identity 18% Template d1o63a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.00

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		45	.	.	.	.	50	.														.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	K	E	S	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	S	E	A	L	V	V	K
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.										.																									.	.	.
Template Conservation																															.																									.	.	.
Template Sequence		Y	L	K	K	T	G	V	I	F	E	R	E	S	S	I	L	R	E	G	K	D	I	V	C	F	X	V	R	P	.	F	D	V	P	T	Y	L	V	H	G	V	A	D	I	G	F	C	G	T	D	V	L	L	E	.	.	.	K	E	T	S	L	I	Q	P	F	F	I	P	T	N	I	S	R	X	V	L	A	G	P
Template Known Secondary structure							T								S	S					T	T								G	.	G	G							T	T	S		S												.	.	.	S					B			S
Template Predicted Secondary structure																															.																									.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	L	T
Query Conservation
Alig confidence									.	.							.	.	.	.																		.	.	.										.
Template Conservation									.	.							.	.	.	.																		.	.	.										.
Template Sequence		K	G	R	G	I	P	E	.	.	G	E	K	R	I	A	.	.	.	.	T	K	F	P	N	V	T	Q	R	Y	C	E	S	K	G	W	H	.	.	.	C	R	I	I	P	L	K	G	S	.	V	E	L	A	P	I	A	G	L	S	D	L	I	V	D	I	T	E	T	G	R	T	L	K	E	N	N	L	E	I	L
Template Known Secondary structure		T	T	T				S	.	.	S						.	.	.	.		S													T			.	.	.							S	S		.	T	T						T	S		S							S	S	S						T	T
Template Predicted Secondary structure									.	.							.	.	.	.																		.	.	.										.
Template SS confidence
		94	.	.	.	.	.	100			.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D	A	Q	Q
Query Conservation
Alig confidence							.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		D	E	I	F	V	.	.	.	.	.	.	I	R	T	H	V	V	V	N	P	V	S	Y	R	T	K	R	E	E	V	V	S	F	L	E	K	L	Q	E	V	I	E
Template Known Secondary structure							.	.	.	.	.	.															T
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions