Job Description Q47537 Confidence 97.62% Date Thu Jan 5 12:36:50 GMT 2012 Rank 88 Aligned Residues 166 % Identity 17% Template d1nh8a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		45	.	.	.	.	50	.																	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	K	E	S	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	S	E	A	L
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																									.	.	.
Template Conservation																																		.																									.	.	.
Template Sequence		I	L	A	E	A	G	Y	R	R	R	T	D	S	K	D	L	T	V	I	D	P	V	N	N	V	E	F	F	F	L	R	P	.	K	D	I	A	I	Y	V	G	S	G	E	L	D	F	G	I	T	G	R	D	L	V	C	D	.	.	.	S	G	A	Q	V	R	E	R	L	A	L	G	F	G	S	S	S	F	R	Y
Template Known Secondary structure						T	T						S	T	T		S					T	T	T	T								G	.	G	G								S	S		S												.	.	.		T										S
Template Predicted Secondary structure																																		.																									.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		109		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		V	.	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G
Query Conservation			.
Alig confidence			.																		.	.	.	.																	.	.	.											.
Template Conservation																					.	.	.	.																	.	.	.											.
Template Sequence		A	A	P	A	G	R	N	W	T	T	A	D	L	A	G	M	R	I	A	.	.	.	.	T	A	Y	P	N	L	V	R	K	D	L	A	T	K	G	I	.	.	.	E	A	T	V	I	R	L	D	G	A	.	V	E	I	S	V	Q	L	G	V	A	D	A	I	A	D	V	V	G	S	G	R	T	L	S	Q	H	D
Template Known Secondary structure					T	T	S				G	G	G	G	T	T					.	.	.	.		S													T		.	.	.								S	S		.		T					T	T	S		S							S	S	S						T	T
Template Predicted Secondary structure																					.	.	.	.																	.	.	.											.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S
Query Conservation
Alig confidence												.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		L	V	A	F	G	E	P	L	C	D	.	.	.	.	.	S	E	A	V	L	I	E	R	A	E	A	R	D	Q	L	V	A	R	V	Q	G	V	V	F	G
Template Known Secondary structure												.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions