Job Description Q47537 Confidence 97.68% Date Thu Jan 5 12:36:50 GMT 2012 Rank 84 Aligned Residues 218 % Identity 14% Template d1lsta_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.											.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.						.
Query Sequence		A	Q	A	V	N	V	T	V	A	Y	Q	T	S	A	E	P	A	.	.	.	.	.	.	.	.	.	.	K	V	A	Q	A	.	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.						.
Alig confidence																			.	.	.	.	.	.	.	.	.	.						.																		.
Template Conservation																																																				.
Template Sequence		A	L	P	Q	T	V	R	I	G	T	D	T	T	Y	A	P	F	S	S	K	D	A	K	G	E	F	I	G	F	D	I	D	L	G	N	E	M	C	K	R	M	Q	V	K	C	T	W	V	A	S	.	D	F	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	I	S	S	L	S	I	T	D	K	R	Q	Q
Template Known Secondary structure					S								S		B	T	T	T	B				T	T					S														T									.		G	G	G							T	T	S		S				S	S		B
Template Predicted Secondary structure																																																				.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G
Query Conservation
Alig confidence									.	.																																																								.	.	.	.
Template Conservation									.	.																																																								.	.	.	.
Template Sequence		E	I	A	F	S	D	K	.	.	L	Y	A	A	D	S	R	L	I	A	A	K	G	S	P	I	Q	P	T	L	E	S	L	K	G	K	H	V	G	V	L	Q	G	S	T	Q	E	A	Y	A	N	D	N	W	R	T	K	G	V	D	V	V	A	Y	A	.	.	.	.	N	Q	D	L	I	Y	S	D	L	T	A	G
Template Known Secondary structure							S		.	.	S	B										T	T					S	S					T	T							T	T	S										T	G	G	G	T							S	.	.	.	.	S										T	T
Template Predicted Secondary structure									.	.																																																								.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	.	.	.	.	.	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D	A	Q	Q	P	Y	I	A	N	P	D	V	W	L
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.																									.	.	.	.			.	.	.	.																		.	.	.	.
Template Conservation																																																			.	.	.	.			.	.	.	.																		.	.	.	.
Template Sequence		R	L	D	A	A	L	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	A	G	K	E	Y	A	F	A	G	P	S	V	K	D	K	K	Y	F	G	D	G	T	G	V	G	L	R	K	D	.	.	.	.	D	T	.	.	.	.	E	L	K	A	A	F	D	K	A	L	T	E	L	R	Q	D	G	.	.	.	.
Template Known Secondary structure		S		S													T	T	T	S	G	G	G	T	T					S	S		B								S	S	B						T	T	.	.	.	.			.	.	.	.																T	T	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.			.	.	.	.																		.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	P	E	N	I	S	K	L	A	R	L	S	G	V	P
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	T	Y	D	K	M	A	K	K	Y	F	D	F	N
Template Known Secondary structure		.	.	.								T	T		S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					222	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions