Job Description Q47537 Confidence 95.25% Date Thu Jan 5 12:36:50 GMT 2012 Rank 122 Aligned Residues 99 % Identity 10% Template d1jnfa2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.60

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.											.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	S	.	.	.	.	.	.	.	.	.	.	E	A	L	V	V	K	K	T	I
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	S	V	T	S	G	G	L	I	E	C	E	S	A	E	T	P	E	D	C	I	A	K	I	M	N	G	E	A	D	A	M	S	L	D	G	G	Y	V	Y	I	A	G	Q	C	G	L	V	P	V	L	A	E	N	Y	E	S	T	D	C	K	K	A	P	E	E	G	Y	L	S	V	A	V	V	K	K	S	N	P	D
Template Known Secondary structure							T	S	S							S	S										T	T	S			B														T	T										S		S		T	T	S				S										S	S			S
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	.	.	I	S	T	T	H	Y	S	L	L	A	A	L	K	H
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		I	N	W	N	N	L	E	G	K	K	S	C	H	T	A	V	D	R	T	A	G	W	N	I	P	M	G	L	L	Y	N
Template Known Secondary structure				G	G	G		T	T	S					S		T	T		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions