Job Description Q47537 Confidence 98.07% Date Thu Jan 5 12:36:50 GMT 2012 Rank 56 Aligned Residues 103 % Identity 12% Template d1ieja_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 1.65

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.
Query Sequence		F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	.	.	.	.	.	.	.	.	.	S	E	A	L	V	V	K	K	T	I	S
Query Conservation																																																														.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.											.
Template Conservation																																																																																	.
Template Sequence		L	T	Q	Q	E	R	I	S	L	T	C	V	Q	K	A	T	Y	L	D	C	I	K	A	I	A	N	N	E	A	D	A	I	T	L	D	G	G	Q	V	F	E	A	G	L	A	P	Y	K	L	K	P	I	A	A	E	V	Y	E	H	T	E	G	S	T	T	S	Y	Y	A	V	A	V	V	K	K	G	T	E	F	.
Template Known Secondary structure			T	T	T	S	S									S	S										T	T	S			B												T	S	T	T	T													S	S	S			S										T	T				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		K	P	E	D	L	I	G	K	R	I	A	V	P	F	.	.	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		T	V	N	D	L	Q	G	K	T	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	T	L	L	H	R	G	A	I	E
Template Known Secondary structure			G	G	G		T	T						S		T	T		T	T	T	T										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions