Job Description Q47537 Confidence 97.87% Date Thu Jan 5 12:36:50 GMT 2012 Rank 69 Aligned Residues 222 % Identity 12% Template d1hsla_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.89

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.											.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.						.
Query Sequence		A	Q	A	V	N	V	T	V	A	Y	Q	T	S	A	E	P	A	.	.	.	.	.	.	.	.	.	.	K	V	A	Q	A	.	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.						.
Alig confidence																			.	.	.	.	.	.	.	.	.	.						.																		.																									.	.
Template Conservation																																																				.																									.	.
Template Sequence		A	I	P	Q	K	I	R	I	G	T	D	P	T	Y	A	P	F	E	S	K	N	A	Q	G	E	L	V	G	F	D	I	D	L	A	K	E	L	C	K	R	I	N	T	Q	C	T	F	V	E	N	.	P	L	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	M	S	S	L	S	I	T	.	.	E	K	R
Template Known Secondary structure					S	S									B	T	T	T	B				T	T					S													T	T									.											T	T	S		S				S	S		B			.	.
Template Predicted Secondary structure																																																				.																									.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G
Query Conservation
Alig confidence																																																																		.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		Q	Q	E	I	A	F	T	D	K	L	Y	A	A	D	S	R	L	V	V	A	K	N	S	D	I	Q	P	T	V	A	S	L	K	G	K	R	V	G	V	L	Q	G	T	T	Q	E	T	F	G	N	E	H	W	A	P	K	G	I	E	I	V	S	Y	Q	.	.	.	.	G	Q	D	N	I	Y	S	D	L	T	A	G
Template Known Secondary structure			T	T	S				S													S	S		S			S	S	G	G	G	G	T	T							T	T	S										T	G	G	G	T							S	.	.	.	.	S											T
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	.	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D	A	Q	Q	P	Y	I	A	N	P	D	V	W	L	K	Q	P	E
Query Conservation																				.
Alig confidence																				.																																	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		R	I	D	A	A	F	Q	D	E	V	A	A	S	E	G	F	L	K	Q	P	V	G	K	D	Y	K	F	G	G	P	A	V	K	D	E	K	L	F	G	V	G	T	G	M	G	L	R	K	E	D	N	.	.	.	.	E	L	R	E	A	L	N	K	A	F	A	E	M	R	A	D	G	.	.	.	.	.	.	.	T
Template Known Secondary structure		S	S	S													T	T	T	S	G	G	G	G	G					S	S					T	T	T	S		S								S	S			.	.	.	.																T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.								.
		248	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	S	K	L	A	R	L	S	G	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	K	L	A	K	K	Y	F	D	F	D
Template Known Secondary structure								T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions