Return to main results Retrieve Phyre Job Id

Job DescriptionQ47537
Confidence97.98%DateThu Jan 5 12:36:50 GMT 2012
Rank63Aligned Residues176
% Identity19%Templated1h3da1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80......... 90.........100......... 110....
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Query Sequence  NTFAKESGATVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQ. . . . . . QVPIEVFLLASKLGNSEALV. . VKKTI
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Template Sequence  RLIAMAENMPIDILRVRD. DDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAW
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   38.40.........50..... ....60.........70.........80.........90.........100.........110......
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  SKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSE
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Template Sequence  DGPLSLNGKRIA. . . . TSYPHLLKRYLDQKGIS. . . FKSCLLNGS. VEVAPRAGLADAICDLVSTGATLEANGLREVEVI
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   117..120........ .130.........140..... ....150.... .....160.........170.........180........
 
   195....200.........210...... ...220.........230...
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Query Sequence  QVGQWGAPTLDVWVVRKDFAEK. HPEVVKAFAKSAIDAQQ
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Template Sequence  YR. . . . . . SKACLIQRDGEMEESKQQLIDKLLTRIQGVIQ
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   189190 .........200.........210.........220..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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