Job Description Q47537 Confidence 97.90% Date Thu Jan 5 12:36:50 GMT 2012 Rank 66 Aligned Residues 99 % Identity 12% Template d1eh3a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.
Query Sequence		K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	.	.	.	.	.	.	.	.	.	S	E	A	L	V	V	K	K	T	I	S	K	P
Query Conservation																																																												.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.											.
Template Conservation																																																																															.
Template Sequence		R	V	R	G	P	P	V	S	C	I	K	R	D	S	P	I	Q	C	I	Q	A	I	A	E	N	R	A	D	A	V	T	L	D	G	G	F	I	Y	E	A	G	L	A	P	Y	K	L	R	P	V	A	A	E	V	Y	G	T	E	R	Q	P	R	T	H	Y	Y	A	V	A	V	V	K	K	G	G	S	F	.	Q	L
Template Known Secondary structure			T	T										S	S										T	T	S			B													S	T	T	T													S	S	S			S										T	T				.		T
Template Predicted Secondary structure																																																																															.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.
		118	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		E	D	L	I	G	K	R	I	A	V	P	F	.	.	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		N	E	L	Q	G	L	K	S	C	H	T	G	L	R	R	T	A	G	W	N	V	P	I	G	T	L	R	P	F	L	D
Template Known Secondary structure		T			T	T						S		T	T		T	T	T	T								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions